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    • Showing Current items.

    hil-1 Histone H1.X [ Caenorhabditis elegans ]

    Gene ID: 179993, updated on 9-Dec-2024

    Summary

    Official Symbol
    hil-1
    Official Full Name
    Histone H1.X
    Primary source
    WormBase:WBGene00001852
    Locus tag
    CELE_C30G7.1
    See related
    AllianceGenome:WB:WBGene00001852
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable double-stranded DNA binding activity and nucleosomal DNA binding activity. Involved in several processes, including body morphogenesis; egg-laying behavior; and pharynx development. Located in intermediate filament cytoskeleton and nucleolus. Is expressed in several structures, including body wall musculature; excretory system; head neurons; marginal cell; and vulval muscle. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See hil-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (14949777..14952799)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Matrix-remodeling-associated protein 7 Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ADP-ribosylation factor-like protein 6-interacting protein 4

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables double-stranded DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables nucleosomal DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of chromatin IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in body morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in chromosome condensation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in egg-laying behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in locomotion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in multicellular organism growth IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of DNA recombination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nucleosome assembly IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in pharynx development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intermediate filament cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleolus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Histone H1.X
    NP_506680.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      14949777..14952799
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074279.7NP_506680.1  Histone H1.X [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506680.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O02556, Q18336
      Conserved Domains (2) summary
      pfam00538
      Location:37111
      Linker_histone; linker histone H1 and H5 family
      cl21453
      Location:96140
      PKc_like; Protein Kinases, catalytic domain