E02H1.5 Uncharacterized protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: E02H1.5
Official Full Name: Uncharacterized protein
Primary source: WormBase:WBGene00008457
Locus tag: CELE_E02H1.5
See related: AllianceGenome:WB:WBGene00008457
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable RNA binding activity. Predicted to be involved in tRNA splicing, via endonucleolytic cleavage and ligation. Predicted to be part of tRNA-splicing ligase complex. Orthologous to human RTRAF (RNA transcription, translation and transport factor). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See E02H1.5 in Genome Data Viewer

Location:: chromosome: II

Exon count:: 6

Sequence:: Chromosome: II; NC_003280.10 (9595224..9596598)

Chromosome II - NC_003280.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

E02H1.5 (e-PCR)
- UniSTS:317701

E02H1.4 (e-PCR)
- UniSTS:321327

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables RNA binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of tRNA-splicing ligase complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Uncharacterized protein

NP_001369864.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003280.10 Reference assembly

Range

9595224..9596598

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001383918.2 → NP_001369864.1 Uncharacterized protein CELE_E02H1.5 [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/Swiss-Prot

Q09526

Conserved Domains (1) summary

pfam10036
Location:8 → 249

RLL; Putative carnitine deficiency-associated protein