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    C34H4.1 Amine oxidase [ Caenorhabditis elegans ]

    Gene ID: 176963, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C34H4.1
    Official Full Name
    Amine oxidase
    Primary source
    WormBase:WBGene00016424
    Locus tag
    CELE_C34H4.1
    See related
    AllianceGenome:WB:WBGene00016424
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in innate immune response. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C34H4.1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    7
    Sequence:
    Chromosome: IV; NC_003282.8 (1555579..1557560)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene CUB_2 domain-containing protein;IgGFc_binding domain-containing protein;Secreted protein Neighboring gene CUB_2 domain-containing protein Neighboring gene pseudo Neighboring gene CUB_2 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in innate immune response HEP PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Amine oxidase
    NP_001368284.1
    • Confirmed by transcript evidence
    NP_500097.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      1555579..1557560
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067696.5 → NP_500097.1  Amine oxidase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500097.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45144
      Conserved Domains (1) summary
      pfam03409
      Location:44 → 376
      Glycoprotein; Transmembrane glycoprotein

    2. NM_001380049.1 → NP_001368284.1  Amine oxidase [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PEZ3
      Conserved Domains (1) summary
      pfam03409
      Location:1 → 78
      Glycoprotein; Transmembrane glycoprotein
    Nucleotide Protein
    Heading Accession and Version

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