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    Y47G6A.19 Peptidase M14 carboxypeptidase A domain-containing protein;ShKT domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171921, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y47G6A.19
    Official Full Name
    Peptidase M14 carboxypeptidase A domain-containing protein;ShKT domain-containing protein
    Primary source
    WormBase:WBGene00021645
    Locus tag
    CELE_Y47G6A.19
    See related
    AllianceGenome:WB:WBGene00021645
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metallocarboxypeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y47G6A.19 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    11
    Sequence:
    Chromosome: I; NC_003279.8 (3523313..3529962, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Sugar phosphate transporter domain-containing protein Neighboring gene ncRNA Neighboring gene Golgi phosphoprotein 3 homolog sauron Neighboring gene Histone acetyltransferase GCN5 Neighboring gene 40S ribosomal protein S19-binding protein 1 Neighboring gene ncRNA Neighboring gene Tyrosine-protein kinase Neighboring gene Poly(U)-binding-splicing factor rnp-6 Neighboring gene RNA interference defective protein 10 Neighboring gene DeHydrogenases, Short chain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallocarboxypeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables metallocarboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Peptidase M14 carboxypeptidase A domain-containing protein;ShKT domain-containing protein
    NP_001021762.2
    • Confirmed by transcript evidence
    NP_001122539.2
    • Partially confirmed by transcript evidence
    NP_001360093.1
    • Partially confirmed by transcript evidence
    NP_001391075.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      3523313..3529962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001404266.1 → NP_001391075.1  ShKT domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7R9SW65

    2. NM_001026591.6 → NP_001021762.2  ShKT domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021762.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2L0D7
      Conserved Domains (3) summary
      cd03860
      Location:134 → 443
      M14_CP_A-B_like; Peptidase M14 carboxypeptidase subfamily A/B-like
      pfam01549
      Location:464 → 501
      ShK; ShK domain-like
      pfam02244
      Location:32 → 102
      Propep_M14; Carboxypeptidase activation peptide

    3. NM_001373809.3 → NP_001360093.1  Peptidase M14 carboxypeptidase A domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AW09
      Conserved Domains (2) summary
      cd03860
      Location:134 → 443
      M14_CP_A-B_like; Peptidase M14 carboxypeptidase subfamily A/B-like
      pfam02244
      Location:32 → 102
      Propep_M14; Carboxypeptidase activation peptide

    4. NM_001129067.5 → NP_001122539.2  ShKT domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001122539.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2L0D8
      Conserved Domains (3) summary
      cd03860
      Location:134 → 439
      M14_CP_A-B_like; Peptidase M14 carboxypeptidase subfamily A/B-like
      pfam01549
      Location:460 → 497
      ShK; ShK domain-like
      pfam02244
      Location:32 → 102
      Propep_M14; Carboxypeptidase activation peptide
    Nucleotide Protein
    Heading Accession and Version

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