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    srlf-30 SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177982, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srlf-30
    Official Full Name
    SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
    Primary source
    WormBase:WBGene00014006
    Locus tag
    CELE_ZK596.1
    See related
    AllianceGenome:WB:WBGene00014006
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in g1AL; g1AR; g1P; g2L; and g2R. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srlf-30 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (10900383..10901386)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene Secreted protein Neighboring gene Transmembrane protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene non-specific serine/threonine protein kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptional regulation of HLH-6-independent and subtype-specific genes expressed in the Caenorhabditis elegans pharyngeal glands. Ghai V, et al. Mech Dev, 2012 Sep-Dec. PMID 22759833
    2. Multiple genes affect sensitivity of Caenorhabditis elegans to the bacterial pathogen Microbacterium nematophilum. Gravato-Nobre MJ, et al. Genetics, 2005 Nov. PMID 16079230, Free PMC Article
    3. Isolation and molecular identification of nematode surface mutants with resistance to bacterial pathogens. O'Rourke D, et al. G3 (Bethesda), 2023 May 2. PMID 36911920, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
    NP_502026.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10900383..10901386
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069625.7 → NP_502026.1  SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502026.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q23545
      Conserved Domains (1) summary
      pfam02520
      Location:54 → 155
      DUF148; Domain of unknown function DUF148
    Nucleotide Protein
    Heading Accession and Version

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