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    LINC01066 long intergenic non-protein coding RNA 1066 [ Homo sapiens (human) ]

    Gene ID: 106144544, updated on 22-Oct-2024

    Summary

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    Official Symbol
    LINC01066provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1066provided by HGNC
    Primary source
    HGNC:HGNC:49104
    See related
    Ensembl:ENSG00000230403 AllianceGenome:HGNC:49104
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LINC01066 in Genome Data Viewer
    Location:
    13q12.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (30995162..30996257, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (30217068..30218163, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (31569299..31570394, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene TEX26 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:31481009-31481510 Neighboring gene mesenteric estrogen dependent adipogenesis Neighboring gene testis expressed 26 Neighboring gene uncharacterized LOC105370145 Neighboring gene NANOG hESC enhancer GRCh37_chr13:31557478-31558053 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:31578926-31579456 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:31579457-31579987 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7548 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr13:31619425-31620624 Neighboring gene uncharacterized LOC124903147 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:31620925-31621454 Neighboring gene uncharacterized LOC102723392 Neighboring gene Sharpr-MPRA regulatory region 1526

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See Variation Viewer (GRCh37.p13)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_189306.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL353680
      Related
      ENST00000415283.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      30995162..30996257 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      30217068..30218163 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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