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    Calhm4 calcium homeostasis modulator family member 4 [ Mus musculus (house mouse) ]

    Gene ID: 270711, updated on 9-Dec-2024

    Summary

    Official Symbol
    Calhm4provided by MGI
    Official Full Name
    calcium homeostasis modulator family member 4provided by MGI
    Primary source
    MGI:MGI:2685489
    See related
    Ensembl:ENSMUSG00000039508 AllianceGenome:MGI:2685489
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm643; Fam26d; 4732454E20Rik
    Summary
    Predicted to enable monoatomic cation channel activity. Predicted to be involved in ATP export and monoatomic ion transmembrane transport. Predicted to be active in plasma membrane. Orthologous to human CALHM4 (calcium homeostasis modulator family member 4). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
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    Genomic context

    See Calhm4 in Genome Data Viewer
    Location:
    10 B1; 10 18.85 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (33914780..33920309, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (34038784..34044313, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA A830082N09 gene Neighboring gene RWD domain containing 1 Neighboring gene STARR-positive B cell enhancer ABC_E9339 Neighboring gene trafficking protein particle complex 3 like Neighboring gene STARR-seq mESC enhancer starr_26263 Neighboring gene calcium homeostasis modulator family member 5 Neighboring gene STARR-positive B cell enhancer ABC_E11433 Neighboring gene calcium homeostasis modulator family member 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in ATP export  
    involved_in monoatomic ion transmembrane transport  
    Component Evidence Code Pubs
    is_active_in plasma membrane  
    located_in plasma membrane  

    General protein information

    Preferred Names
    calcium homeostasis modulator protein 4
    Names
    family with sequence similarity 26, member D
    protein FAM26D

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081165.1NP_001074634.1  calcium homeostasis modulator protein 4

      See identical proteins and their annotated locations for NP_001074634.1

      Status: PROVISIONAL

      Source sequence(s)
      AC153962
      Consensus CDS
      CCDS35878.1
      UniProtKB/Swiss-Prot
      Q8CE93
      Related
      ENSMUSP00000042466.6, ENSMUST00000048052.7
      Conserved Domains (1) summary
      pfam14798
      Location:14258
      Ca_hom_mod; Calcium homeostasis modulator

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      33914780..33920309 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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