NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_041773.1 RefSeqGene
- Range
-
5010..34085
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001302378.2 → NP_001289307.1 rabenosyn-5
See identical proteins and their annotated locations for NP_001289307.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AC090954, AK291288, BX111409
- Consensus CDS
-
CCDS2623.1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
- Related
- ENSP00000422551.1, ENST00000476527.7
- Conserved Domains (3) summary
-
- cd15716
Location:151 → 262
- FYVE_RBNS5; FYVE domain found in FYVE finger-containing Rab5 effector protein rabenosyn-5 (Rbsn-5) and similar proteins
- pfam11464
Location:461 → 499
- Rbsn; Rabenosyn Rab binding domain
- pfam16601
Location:548 → 727
- NPF; Rabosyn-5 repeating NPF sequence-motif
-
NM_022340.4 → NP_071735.2 rabenosyn-5
See identical proteins and their annotated locations for NP_071735.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AB209673, AC090954, AY009133, BF513881, BX111409, DA320360
- Consensus CDS
-
CCDS2623.1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
- Related
- ENSP00000253699.3, ENST00000253699.7
- Conserved Domains (3) summary
-
- cd15716
Location:151 → 262
- FYVE_RBNS5; FYVE domain found in FYVE finger-containing Rab5 effector protein rabenosyn-5 (Rbsn-5) and similar proteins
- pfam11464
Location:461 → 499
- Rbsn; Rabenosyn Rab binding domain
- pfam16601
Location:548 → 727
- NPF; Rabosyn-5 repeating NPF sequence-motif
RNA
-
NR_126155.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks several exons and its 3' terminal exon extends past a splice site that is used in variant 1. This variant is represented as non-coding because it lacks a large portion of the coding region found in variant 1 and the predicted protein does not meet RefSeq quality criteria.
- Source sequence(s)
-
BC032628, DA320360
- Related
-
ENST00000449050.5
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
15070073..15099148 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005265385.5 → XP_005265442.1 rabenosyn-5 isoform X1
See identical proteins and their annotated locations for XP_005265442.1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
- Conserved Domains (3) summary
-
- cd15716
Location:151 → 262
- FYVE_RBNS5; FYVE domain found in FYVE finger-containing Rab5 effector protein rabenosyn-5 (Rbsn-5) and similar proteins
- pfam11464
Location:461 → 499
- Rbsn; Rabenosyn Rab binding domain
- pfam16601
Location:548 → 727
- NPF; Rabosyn-5 repeating NPF sequence-motif
-
XM_005265384.5 → XP_005265441.1 rabenosyn-5 isoform X1
See identical proteins and their annotated locations for XP_005265441.1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
- Conserved Domains (3) summary
-
- cd15716
Location:151 → 262
- FYVE_RBNS5; FYVE domain found in FYVE finger-containing Rab5 effector protein rabenosyn-5 (Rbsn-5) and similar proteins
- pfam11464
Location:461 → 499
- Rbsn; Rabenosyn Rab binding domain
- pfam16601
Location:548 → 727
- NPF; Rabosyn-5 repeating NPF sequence-motif
-
XM_017007023.2 → XP_016862512.1 rabenosyn-5 isoform X1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
- Conserved Domains (3) summary
-
- cd15716
Location:151 → 262
- FYVE_RBNS5; FYVE domain found in FYVE finger-containing Rab5 effector protein rabenosyn-5 (Rbsn-5) and similar proteins
- pfam11464
Location:461 → 499
- Rbsn; Rabenosyn Rab binding domain
- pfam16601
Location:548 → 727
- NPF; Rabosyn-5 repeating NPF sequence-motif
-
XM_047448707.1 → XP_047304663.1 rabenosyn-5 isoform X1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
-
XM_047448706.1 → XP_047304662.1 rabenosyn-5 isoform X1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
-
XM_011534001.3 → XP_011532303.1 rabenosyn-5 isoform X2
- UniProtKB/TrEMBL
-
A8K5H3
- Conserved Domains (3) summary
-
- cd15716
Location:63 → 174
- FYVE_RBNS5; FYVE domain found in FYVE finger-containing Rab5 effector protein rabenosyn-5 (Rbsn-5) and similar proteins
- pfam11464
Location:370 → 409
- Rbsn; Rabenosyn Rab binding domain
- pfam16601
Location:460 → 639
- NPF; Rabosyn-5 repeating NPF sequence-motif
-
XM_047448708.1 → XP_047304664.1 rabenosyn-5 isoform X4
-
XM_017007026.2 → XP_016862515.1 rabenosyn-5 isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
15072487..15101645 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054347521.1 → XP_054203496.1 rabenosyn-5 isoform X1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
-
XM_054347518.1 → XP_054203493.1 rabenosyn-5 isoform X1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
-
XM_054347517.1 → XP_054203492.1 rabenosyn-5 isoform X1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
-
XM_054347520.1 → XP_054203495.1 rabenosyn-5 isoform X1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
-
XM_054347519.1 → XP_054203494.1 rabenosyn-5 isoform X1
- UniProtKB/Swiss-Prot
- B4DWY8, C9J4P5, Q3KP30, Q59EY8, Q8NAQ1, Q9H1K0
- UniProtKB/TrEMBL
-
A8K5H3
-
XM_054347522.1 → XP_054203497.1 rabenosyn-5 isoform X2
- UniProtKB/TrEMBL
-
A8K5H3
-
XM_054347524.1 → XP_054203499.1 rabenosyn-5 isoform X4
-
XM_054347523.1 → XP_054203498.1 rabenosyn-5 isoform X3