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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_030036.1 RefSeqGene
- Range
-
4985..28247
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001244705.2 → NP_001231634.1 cysteine sulfinic acid decarboxylase isoform 2
See identical proteins and their annotated locations for NP_001231634.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at a downstream, in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC073573, BC052249, BQ028782
- Consensus CDS
-
CCDS58235.1
- UniProtKB/Swiss-Prot
- A8K0U4, Q4QQH9, Q9UNJ5, Q9Y600, Q9Y601
- UniProtKB/TrEMBL
-
B2RCT5
- Related
- ENSP00000415485.1, ENST00000444623.6
- Conserved Domains (1) summary
-
- cd06450
Location:89 → 489
- DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...
-
NM_001244706.2 → NP_001231635.1 cysteine sulfinic acid decarboxylase isoform 3
See identical proteins and their annotated locations for NP_001231635.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a large portion of the 5' coding region and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AB044561, BQ028782
- UniProtKB/TrEMBL
-
Q96JQ3
- Conserved Domains (1) summary
-
- cl18945
Location:2 → 256
- AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
-
NM_015989.5 → NP_057073.4 cysteine sulfinic acid decarboxylase isoform 1
See identical proteins and their annotated locations for NP_057073.4
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AF116548, AV655618, BC099717, DA687716
- Consensus CDS
-
CCDS8848.2
- UniProtKB/TrEMBL
-
J3KPG9
- Related
- ENSP00000267085.3, ENST00000267085.8
- Conserved Domains (1) summary
-
- cd06450
Location:116 → 516
- DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
53157663..53181351 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_024449012.2 → XP_024304780.2 cysteine sulfinic acid decarboxylase isoform X3
- UniProtKB/Swiss-Prot
- A8K0U4, Q4QQH9, Q9UNJ5, Q9Y600, Q9Y601
- UniProtKB/TrEMBL
-
B2RCT5
-
XM_024449011.2 → XP_024304779.2 cysteine sulfinic acid decarboxylase isoform X2
- UniProtKB/TrEMBL
-
B2RCT5
-
XM_047428957.1 → XP_047284913.1 cysteine sulfinic acid decarboxylase isoform X1
- UniProtKB/TrEMBL
-
B2RCT5
-
XM_047428961.1 → XP_047284917.1 cysteine sulfinic acid decarboxylase isoform X5
- UniProtKB/TrEMBL
-
J3KPG9
-
XM_047428959.1 → XP_047284915.1 cysteine sulfinic acid decarboxylase isoform X4
- UniProtKB/TrEMBL
-
J3KPG9
-
XM_024449014.2 → XP_024304782.1 cysteine sulfinic acid decarboxylase isoform X3
- UniProtKB/Swiss-Prot
- A8K0U4, Q4QQH9, Q9UNJ5, Q9Y600, Q9Y601
- UniProtKB/TrEMBL
-
B2RCT5
- Related
- ENSP00000410648.2, ENST00000453446.6
- Conserved Domains (1) summary
-
- cd06450
Location:89 → 489
- DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...
-
XM_024449013.2 → XP_024304781.1 cysteine sulfinic acid decarboxylase isoform X2
- UniProtKB/TrEMBL
-
B2RCT5
- Conserved Domains (1) summary
-
- cd06450
Location:89 → 520
- DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...
-
XM_047428960.1 → XP_047284916.1 cysteine sulfinic acid decarboxylase isoform X1
- UniProtKB/TrEMBL
-
B2RCT5
-
XM_047428958.1 → XP_047284914.1 cysteine sulfinic acid decarboxylase isoform X4
- UniProtKB/TrEMBL
-
J3KPG9
-
XM_047428962.1 → XP_047284918.1 cysteine sulfinic acid decarboxylase isoform X6
-
XM_011538449.1 → XP_011536751.1 cysteine sulfinic acid decarboxylase isoform X9
See identical proteins and their annotated locations for XP_011536751.1
- Conserved Domains (1) summary
-
- cl18945
Location:35 → 289
- AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
-
XM_047428966.1 → XP_047284922.1 cysteine sulfinic acid decarboxylase isoform X10
-
XM_047428964.1 → XP_047284920.1 cysteine sulfinic acid decarboxylase isoform X8
- Related
- ENSP00000369175.1, ENST00000379846.5
-
XM_047428965.1 → XP_047284921.1 cysteine sulfinic acid decarboxylase isoform X9
-
XM_047428963.1 → XP_047284919.1 cysteine sulfinic acid decarboxylase isoform X7
RNA
-
XR_007063086.1 RNA Sequence
-
XR_007063087.1 RNA Sequence
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XR_007063085.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
53123259..53147240 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054372201.1 → XP_054228176.1 cysteine sulfinic acid decarboxylase isoform X11
-
XM_054372202.1 → XP_054228177.1 cysteine sulfinic acid decarboxylase isoform X12
- UniProtKB/TrEMBL
-
J3KPG9
-
XM_054372203.1 → XP_054228178.1 cysteine sulfinic acid decarboxylase isoform X13
- UniProtKB/TrEMBL
-
J3KPG9
-
XM_054372207.1 → XP_054228182.1 cysteine sulfinic acid decarboxylase isoform X5
- UniProtKB/TrEMBL
-
J3KPG9
-
XM_054372205.1 → XP_054228180.1 cysteine sulfinic acid decarboxylase isoform X4
- UniProtKB/TrEMBL
-
J3KPG9
-
XM_054372206.1 → XP_054228181.1 cysteine sulfinic acid decarboxylase isoform X2
- UniProtKB/TrEMBL
-
B2RCT5
-
XM_054372208.1 → XP_054228183.1 cysteine sulfinic acid decarboxylase isoform X3
- UniProtKB/Swiss-Prot
- A8K0U4, Q4QQH9, Q9UNJ5, Q9Y600, Q9Y601
- UniProtKB/TrEMBL
-
B2RCT5
-
XM_054372204.1 → XP_054228179.1 cysteine sulfinic acid decarboxylase isoform X4
- UniProtKB/TrEMBL
-
J3KPG9
-
XM_054372209.1 → XP_054228184.1 cysteine sulfinic acid decarboxylase isoform X6
-
XM_054372214.1 → XP_054228189.1 cysteine sulfinic acid decarboxylase isoform X9
-
XM_054372216.1 → XP_054228191.1 cysteine sulfinic acid decarboxylase isoform X10
-
XM_054372212.1 → XP_054228187.1 cysteine sulfinic acid decarboxylase isoform X8
-
XM_054372215.1 → XP_054228190.1 cysteine sulfinic acid decarboxylase isoform X9
-
XM_054372210.1 → XP_054228185.1 cysteine sulfinic acid decarboxylase isoform X14
-
XM_054372211.1 → XP_054228186.1 cysteine sulfinic acid decarboxylase isoform X15
-
XM_054372213.1 → XP_054228188.1 cysteine sulfinic acid decarboxylase isoform X16
RNA
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XR_008488608.1 RNA Sequence
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XR_008488607.1 RNA Sequence
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XR_008488609.1 RNA Sequence