U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Gja8 gap junction protein, alpha 8 [ Mus musculus (house mouse) ]

    Gene ID: 14616, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gja8provided by MGI
    Official Full Name
    gap junction protein, alpha 8provided by MGI
    Primary source
    MGI:MGI:99953
    See related
    Ensembl:ENSMUSG00000049908 AllianceGenome:MGI:99953
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    dcm; Aey5; Cx50; Cxnl; Cnx50; Lop10
    Summary
    Predicted to enable gap junction channel activity and identical protein binding activity. Acts upstream of or within lens development in camera-type eye. Located in plasma membrane. Is expressed in several structures, including eye; testis; and thyroid gland. Used to study cataract 1 multiple types. Human ortholog(s) of this gene implicated in cataract and cataract 1 multiple types. Orthologous to human GJA8 (gap junction protein alpha 8). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gja8 in Genome Data Viewer
    Location:
    3 F2.1; 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96820882..96833367, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96913566..96926051, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930442L01 gene Neighboring gene PDZ domain containing 1 Neighboring gene G protein-coupled receptor 89 Neighboring gene STARR-seq mESC enhancer starr_08450 Neighboring gene STARR-seq mESC enhancer starr_08451 Neighboring gene STARR-seq mESC enhancer starr_08452 Neighboring gene RIKEN cDNA 4930573H18 gene Neighboring gene gap junction protein, alpha 5 Neighboring gene STARR-seq mESC enhancer starr_08454 Neighboring gene predicted gene, 31120

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables gap junction channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    contributes_to gap junction channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables gap junction channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables gap junction channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of connexin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of connexin complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of connexin complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    gap junction alpha-8 protein
    Names
    alpha 8 connexin
    connexin l
    connexin-50
    gap junction membrane channel protein alpha 8
    lens fiber protein MP70
    lens opacity 10

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008123.3NP_032149.1  gap junction alpha-8 protein

      See identical proteins and their annotated locations for NP_032149.1

      Status: VALIDATED

      Source sequence(s)
      AC127297, CF732960, CV557810, GU363513
      Consensus CDS
      CCDS17651.1
      UniProtKB/Swiss-Prot
      P28236
      UniProtKB/TrEMBL
      Q548M7
      Related
      ENSMUSP00000049532.6, ENSMUST00000062944.7
      Conserved Domains (3) summary
      pfam00029
      Location:3235
      Connexin
      pfam03509
      Location:267332
      Connexin50; Gap junction alpha-8 protein (Cx50)
      pfam16791
      Location:408440
      Connexin40_C; Connexin 40 C-terminal domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      96820882..96833367 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)