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    5033430I15Rik RIKEN cDNA 5033430I15 gene [ Mus musculus (house mouse) ]

    Gene ID: 76000, updated on 22-Oct-2024

    Summary

    Official Symbol
    5033430I15Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 5033430I15 geneprovided by MGI
    Primary source
    MGI:MGI:1923250
    See related
    Ensembl:ENSMUSG00000038152 AllianceGenome:MGI:1923250
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Ubiquitous expression in CNS E18 (RPKM 2.2), kidney adult (RPKM 2.2) and 28 other tissues See more
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    Genomic context

    See 5033430I15Rik in Genome Data Viewer
    Location:
    13 A5; 13 22.95 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (46118700..46119984)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (45965224..45966508)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34395 Neighboring gene predicted gene, 34582 Neighboring gene guanosine monophosphate reductase Neighboring gene ataxin 1 Neighboring gene STARR-positive B cell enhancer mm9_chr13:45744500-45744801 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:45789016-45789125 Neighboring gene STARR-seq mESC enhancer starr_34397 Neighboring gene STARR-seq mESC enhancer starr_34398 Neighboring gene STARR-positive B cell enhancer mm9_chr13:45980000-45980300 Neighboring gene STARR-seq mESC enhancer starr_34399 Neighboring gene STARR-positive B cell enhancer mm9_chr13:46017736-46018037 Neighboring gene STARR-positive B cell enhancer mm9_chr13:46060268-46060569 Neighboring gene STARR-seq mESC enhancer starr_34400 Neighboring gene STARR-seq mESC enhancer starr_34402 Neighboring gene STARR-seq mESC enhancer starr_34403 Neighboring gene STARR-seq mESC enhancer starr_34404 Neighboring gene predicted gene, 34991 Neighboring gene predicted gene, 45949

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_167678.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC154401
      Related
      ENSMUST00000374993.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      46118700..46119984
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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