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    escC T3SS structure protein EscC [ Escherichia coli O157:H7 str. Sakai ]

    Gene ID: 915461, updated on 6-Oct-2023

    Summary

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    Gene symbol
    escC
    Gene description
    T3SS structure protein EscC
    Locus tag
    ECs_4575
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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    Genomic context

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    Sequence:
    NC_002695.2 (4611501..4613039)

    NC_002695.2Genomic Context describing neighboring genes Neighboring gene T3SS component Neighboring gene T3SS structure protein EscJ Neighboring gene T3SS secretion switching protein SepD Neighboring gene T3SS chaperone CesD Neighboring gene positive regulator GrlA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002695.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The role of EscD in supporting EscC polymerization in the type III secretion system of enteropathogenic Escherichia coli. Tseytin I, et al. Biochim Biophys Acta Biomembr, 2018 Feb. PMID 28988128
    2. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
    3. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
    4. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
    5. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data show that EscD is crucial for the oligomerization of EscC.
      Title: The role of EscD in supporting EscC polymerization in the type III secretion system of enteropathogenic Escherichia coli.
    Submit: New GeneRIF Correction

    General protein information

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    Preferred Names
    T3SS structure protein EscC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002695.2 Reference assembly

      Range
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_312602.1 T3SS structure protein EscC [Escherichia coli O157:H7 str. Sakai]

      See identical proteins and their annotated locations for NP_312602.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      O52135
      Conserved Domains (1) summary
      PRK15346
      Location:1 → 511
      PRK15346; EscC/YscC/HrcC family type III secretion system outer membrane ring protein
    Nucleotide Protein
    Heading Accession and Version

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