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    Actrt2 actin-related protein T2 [ Mus musculus (house mouse) ]

    Gene ID: 73353, updated on 9-Dec-2024

    Summary

    Official Symbol
    Actrt2provided by MGI
    Official Full Name
    actin-related protein T2provided by MGI
    Primary source
    MGI:MGI:1920603
    See related
    Ensembl:ENSMUSG00000051276 AllianceGenome:MGI:1920603
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Arpm2; Arp-T2; 1700052K15Rik
    Summary
    Predicted to be located in cytoplasm and cytoskeleton. Predicted to be active in actin cytoskeleton. Is expressed in Meckel's cartilage; liver lobe; and skeleton. Orthologous to human ACTRT2 (actin related protein T2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Actrt2 in Genome Data Viewer
    Location:
    4 E2; 4 84.69 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (154750885..154752324, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (154666428..154667867, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene Prdm16 opposite strand transcript Neighboring gene predicted gene 13110 Neighboring gene STARR-seq mESC enhancer starr_12237 Neighboring gene VISTA enhancer mm1492 Neighboring gene STARR-seq mESC enhancer starr_12238 Neighboring gene VISTA enhancer mm1088 Neighboring gene VISTA enhancer mm1090 Neighboring gene tetratricopeptide repeat domain 34 Neighboring gene STARR-positive B cell enhancer ABC_E6294 Neighboring gene STARR-seq mESC enhancer starr_12240 Neighboring gene STARR-positive B cell enhancer ABC_E2734 Neighboring gene predicted gene 13112 Neighboring gene membrane metallo-endopeptidase-like 1

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    actin-related protein T2
    Names
    actin related protein M2 (Arpm2)
    actin-related protein M2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028513.3NP_082789.1  actin-related protein T2

      See identical proteins and their annotated locations for NP_082789.1

      Status: VALIDATED

      Source sequence(s)
      AK077010, BC052344, BU946350, BY446288
      Consensus CDS
      CCDS19014.1
      UniProtKB/Swiss-Prot
      Q9D9L5
      Related
      ENSMUSP00000050377.4, ENSMUST00000060062.5
      Conserved Domains (1) summary
      smart00268
      Location:10377
      ACTIN; Actin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      154750885..154752324 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)