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    Vmn1r233 vomeronasal 1 receptor 233 [ Mus musculus (house mouse) ]

    Gene ID: 171236, updated on 27-Nov-2024

    Summary

    Official Symbol
    Vmn1r233provided by MGI
    Official Full Name
    vomeronasal 1 receptor 233provided by MGI
    Primary source
    MGI:MGI:2159639
    See related
    Ensembl:ENSMUSG00000045575 AllianceGenome:MGI:2159639
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1rf5
    Summary
    Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane. Is expressed in amygdala; olfactory epithelium; and telencephalon mantle layer. Orthologous to human VN1R4 (vomeronasal 1 receptor 4). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See Vmn1r233 in Genome Data Viewer
    Location:
    17 A3.2; 17 11.4 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (21213989..21214948, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (20993727..20994686, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2, regulatory subunit A, alpha Neighboring gene vomeronasal 1 receptor, pseudogene 145 Neighboring gene STARR-seq mESC enhancer starr_42003 Neighboring gene STARR-positive B cell enhancer ABC_E7493 Neighboring gene zinc finger protein 160 Neighboring gene myeloid/lymphoid or mixed lineage-leukemia translocation to 4 homolog pseudogene

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables pheromone binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables pheromone receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to pheromone ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    vomeronasal type-1 receptor 2
    Names
    vomernasal 1 receptor Vmn1r233
    vomeronasal 1 receptor, F5
    vomeronasal receptor V1RF5
    vomeronasal type 1 receptor F5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134202.1NP_598963.1  vomeronasal type-1 receptor 2

      See identical proteins and their annotated locations for NP_598963.1

      Status: PROVISIONAL

      Source sequence(s)
      AY065516
      Consensus CDS
      CCDS28433.1
      UniProtKB/TrEMBL
      F6MC17, F6MC19, F6MC28, Q8R294
      Related
      ENSMUSP00000158355.2, ENSMUST00000237629.2
      Conserved Domains (1) summary
      pfam03402
      Location:84294
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      21213989..21214948 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)