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    Zfand5 zinc finger, AN1-type domain 5 [ Mus musculus (house mouse) ]

    Gene ID: 22682, updated on 9-Dec-2024

    Summary

    Official Symbol
    Zfand5provided by MGI
    Official Full Name
    zinc finger, AN1-type domain 5provided by MGI
    Primary source
    MGI:MGI:1278334
    See related
    Ensembl:ENSMUSG00000024750 AllianceGenome:MGI:1278334
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Za20d2; Zfp216; 2310057A04Rik; 5830475F03Rik
    Summary
    Predicted to enable DNA binding activity and zinc ion binding activity. Acts upstream of or within several processes, including face development; fibroblast migration; and platelet-derived growth factor receptor signaling pathway. Predicted to be located in cytoplasm. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Orthologous to human ZFAND5 (zinc finger AN1-type containing 5). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 34.4), ovary adult (RPKM 17.5) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Zfand5 in Genome Data Viewer
    Location:
    19 B; 19 14.32 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (21249150..21264204)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (21271786..21286840)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:21219297-21219406 Neighboring gene VISTA enhancer mm1562 Neighboring gene predicted gene, 32979 Neighboring gene STARR-seq mESC enhancer starr_45720 Neighboring gene predicted gene, 45918 Neighboring gene STARR-seq mESC enhancer starr_45722 Neighboring gene VISTA enhancer mm269 Neighboring gene predicted gene, 57661 Neighboring gene STARR-seq mESC enhancer starr_45723 Neighboring gene STARR-seq mESC enhancer starr_45724 Neighboring gene guanine deaminase Neighboring gene STARR-seq mESC enhancer starr_45725 Neighboring gene STARR-seq mESC enhancer starr_45726 Neighboring gene predicted gene 3443

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Gene trapped (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    General protein information

    Preferred Names
    AN1-type zinc finger protein 5
    Names
    zinc finger A20 domain-containing protein 2
    zinc finger protein 216
    zinc finger, A20 domain containing 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009551.5NP_033577.1  AN1-type zinc finger protein 5

      See identical proteins and their annotated locations for NP_033577.1

      Status: VALIDATED

      Source sequence(s)
      AC103947
      Consensus CDS
      CCDS29697.1
      UniProtKB/Swiss-Prot
      O88878, Q3B7K8
      Related
      ENSMUSP00000158187.2, ENSMUST00000237651.2
      Conserved Domains (2) summary
      smart00154
      Location:154191
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:1235
      zf-A20; A20-like zinc finger

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      21249150..21264204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006527058.4XP_006527121.1  AN1-type zinc finger protein 5 isoform X1

      See identical proteins and their annotated locations for XP_006527121.1

      UniProtKB/Swiss-Prot
      O88878, Q3B7K8
      Related
      ENSMUSP00000025659.5, ENSMUST00000025659.12
      Conserved Domains (2) summary
      smart00154
      Location:154191
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:1235
      zf-A20; A20-like zinc finger