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    Fbxw15 F-box and WD-40 domain protein 15 [ Mus musculus (house mouse) ]

    Gene ID: 382105, updated on 27-Nov-2024

    Summary

    Official Symbol
    Fbxw15provided by MGI
    Official Full Name
    F-box and WD-40 domain protein 15provided by MGI
    Primary source
    MGI:MGI:3505701
    See related
    Ensembl:ENSMUSG00000074060 AllianceGenome:MGI:3505701
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fbxo12J
    Summary
    Predicted to be involved in protein ubiquitination. Located in endoplasmic reticulum. Orthologous to human FBXW12 (F-box and WD repeat domain containing 12). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in ovary adult (RPKM 1.6), bladder adult (RPKM 0.9) and 5 other tissues See more
    NEW
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    Genomic context

    See Fbxw15 in Genome Data Viewer
    Location:
    9 F2; 9 59.67 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (109381670..109397330, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (109552602..109568262, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene F-box and WD-40 domain protein 19 Neighboring gene STARR-seq mESC enhancer starr_25234 Neighboring gene F-box and WD-40 domain protein 23 Neighboring gene STARR-seq mESC enhancer starr_25236 Neighboring gene F-box and WD-40 domain protein 24 Neighboring gene F-box and WD-40 domain protein 25

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC117507

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    F-box/WD repeat-containing protein 15

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199036.2NP_950201.2  F-box/WD repeat-containing protein 15

      Status: VALIDATED

      Source sequence(s)
      AK087669, CO795020, DQ067445
      Consensus CDS
      CCDS23553.1
      UniProtKB/Swiss-Prot
      L7N1X6, Q4FZL6, Q4PLJ2, Q8BI39
      Related
      ENSMUSP00000058175.7, ENSMUST00000056745.12
      Conserved Domains (1) summary
      pfam12937
      Location:546
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      109381670..109397330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006512169.2XP_006512232.1  F-box/WD repeat-containing protein 15 isoform X1

      See identical proteins and their annotated locations for XP_006512232.1

      UniProtKB/Swiss-Prot
      L7N1X6
      Related
      ENSMUSP00000143385.2, ENSMUST00000198397.5
      Conserved Domains (1) summary
      pfam12937
      Location:546
      F-box-like
    2. XM_011242979.3XP_011241281.1  F-box/WD repeat-containing protein 15 isoform X2

      Conserved Domains (1) summary
      pfam12937
      Location:546
      F-box-like