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    Mief2 mitochondrial elongation factor 2 [ Mus musculus (house mouse) ]

    Gene ID: 237781, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mief2provided by MGI
    Official Full Name
    mitochondrial elongation factor 2provided by MGI
    Primary source
    MGI:MGI:2144199
    See related
    Ensembl:ENSMUSG00000018599 AllianceGenome:MGI:2144199
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm11; Smcr7
    Summary
    Involved in positive regulation of mitochondrial fission. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial outer membrane. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 49. Orthologous to human MIEF2 (mitochondrial elongation factor 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 15.6), ovary adult (RPKM 9.4) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mief2 in Genome Data Viewer
    Location:
    11 B2; 11 37.81 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (60619224..60623777)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (60728398..60732951)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_29656 Neighboring gene Uba52 pseudogene Neighboring gene LLGL1 scribble cell polarity complex component Neighboring gene flightless I actin binding protein Neighboring gene STARR-positive B cell enhancer ABC_E2991 Neighboring gene microRNA 5100 Neighboring gene STARR-seq mESC enhancer starr_29657 Neighboring gene predicted gene, 23341 Neighboring gene topoisomerase (DNA) III alpha Neighboring gene STARR-seq mESC enhancer starr_29659

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (1) 

    General gene information

    Markers

    Clone Names

    • MGC113770

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrion organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in mitochondrion organization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of mitochondrial fission IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of mitochondrial fission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of mitochondrial fission ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of mitochondrial fission ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of protein targeting to membrane ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of protein targeting to membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of mitochondrion organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of mitochondrion organization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in mitochondrial outer membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrial outer membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrial outer membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    mitochondrial dynamics protein MID49
    Names
    mitochondrial dynamic protein MID49
    mitochondrial dynamic protein of 49 kDa homolog
    mitochondrial dynamics protein of 49 kDa homolog
    smith-Magenis syndrome chromosomal region candidate gene 7 protein homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009927.2NP_001009927.1  mitochondrial dynamics protein MID49

      See identical proteins and their annotated locations for NP_001009927.1

      Status: VALIDATED

      Source sequence(s)
      BB871610, BC088984, BY234735
      Consensus CDS
      CCDS24796.1
      UniProtKB/Swiss-Prot
      Q5NCS9
      Related
      ENSMUSP00000018743.5, ENSMUST00000018743.5
      Conserved Domains (1) summary
      pfam03281
      Location:392439
      Mab-21; Mab-21 protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      60619224..60623777
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)