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    Erich3 glutamate rich 3 [ Mus musculus (house mouse) ]

    Gene ID: 209601, updated on 9-Dec-2024

    Summary

    Official Symbol
    Erich3provided by MGI
    Official Full Name
    glutamate rich 3provided by MGI
    Primary source
    MGI:MGI:1919095
    See related
    Ensembl:ENSMUSG00000078161 AllianceGenome:MGI:1919095
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm133; 1700013E18Rik; 4922501L14Rik; 5031409G23Rik
    Summary
    Predicted to be involved in cilium assembly. Predicted to be located in cytoplasm and non-motile cilium. Orthologous to human ERICH3 (glutamate rich 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 52.8) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Erich3 in Genome Data Viewer
    Location:
    3 H4; 3 79.28 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (154416770..154454649)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (154663731..154767790)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_09339 Neighboring gene predicted gene, 40186 Neighboring gene STARR-positive B cell enhancer ABC_E9581 Neighboring gene STARR-seq mESC enhancer starr_09341 Neighboring gene tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) Neighboring gene STARR-positive B cell enhancer ABC_E4607 Neighboring gene STARR-seq mESC enhancer starr_09345 Neighboring gene crystallin, zeta Neighboring gene STARR-seq mESC enhancer starr_09346 Neighboring gene predicted gene 20389 Neighboring gene TNNI3 interacting kinase Neighboring gene STARR-seq mESC enhancer starr_09349 Neighboring gene leucine rich repeat containing 4 pseudogene Neighboring gene STARR-seq mESC enhancer starr_09350 Neighboring gene STARR-seq mESC enhancer starr_09351 Neighboring gene STARR-seq mESC enhancer starr_09352 Neighboring gene STARR-seq mESC enhancer starr_09353 Neighboring gene STARR-positive B cell enhancer ABC_E7951 Neighboring gene fucose-1-phosphate guanylyltransferase

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    General gene information

    Markers

    Clone Names

    • MGC169860, MGC175727

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in cilium assembly ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in non-motile cilium ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    glutamate rich 3
    Names
    glutamate-rich protein 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175176.3NP_780385.1  glutamate rich 3

      See identical proteins and their annotated locations for NP_780385.1

      Status: PROVISIONAL

      Source sequence(s)
      AK076632
      Consensus CDS
      CCDS51099.1
      UniProtKB/TrEMBL
      A6H6D7
      Related
      ENSMUSP00000062837.7, ENSMUST00000051862.8
      Conserved Domains (1) summary
      pfam15257
      Location:105208
      DUF4590; Domain of unknown function (DUF4590)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      154416770..154454649
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)