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    CDRT15L2 CMT1A duplicated region transcript 15 like 2 [ Homo sapiens (human) ]

    Gene ID: 256223, updated on 27-Nov-2024

    Summary

    Official Symbol
    CDRT15L2provided by HGNC
    Official Full Name
    CMT1A duplicated region transcript 15 like 2provided by HGNC
    Primary source
    HGNC:HGNC:34075
    See related
    Ensembl:ENSG00000214819 AllianceGenome:HGNC:34075
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis (RPKM 4.8) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See CDRT15L2 in Genome Data Viewer
    Location:
    17p11.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (20579724..20580911)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (20528374..20529561)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (20483037..20484224)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene COTL1 pseudogene 2 Neighboring gene uncharacterized LOC105371580 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:20482200-20483198 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:20487547-20488084 Neighboring gene zinc finger SWIM-type containing 5 pseudogene 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:20489421-20489620 Neighboring gene Meis homeobox 3 pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    CMT1A duplicated region transcript 15 protein-like protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001190790.2NP_001177719.1  CMT1A duplicated region transcript 15 protein-like protein

      See identical proteins and their annotated locations for NP_001177719.1

      Status: VALIDATED

      Source sequence(s)
      AA446206, AI016778
      Consensus CDS
      CCDS54096.1
      UniProtKB/Swiss-Prot
      A8MXV6
      Related
      ENSP00000382000.1, ENST00000399044.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      20579724..20580911
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      20528374..20529561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)