Fam83c family with sequence similarity 83, member C [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Fam83cprovided by MGI
Official Full Name: family with sequence similarity 83, member Cprovided by MGI
Primary source: MGI:MGI:1918655
See related: Ensembl:ENSMUSG00000074647 AllianceGenome:MGI:1918655
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 5530400B04Rik
Summary: Predicted to enable protein kinase binding activity. Predicted to be involved in signal transduction. Orthologous to human FAM83C (family with sequence similarity 83 member C). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in stomach adult (RPKM 9.8), colon adult (RPKM 5.4) and 6 other tissues See more
Orthologs: human all
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Genomic context

Location:: 2 H1; 2 77.26 cM

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	2	NC_000068.8 (155671103..155676772, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	2	NC_000068.7 (155829183..155834852, complement)

Chromosome 2 - NC_000068.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables protein kinase binding	IBA Inferred from Biological aspect of Ancestor more info
enables protein kinase binding	IEA Inferred from Electronic Annotation more info
enables protein kinase binding	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in signal transduction	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: protein FAM83C

Names: ortholog of family with sequence similarity 83, member C FAM83C (5530400B04Rik)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_027788.3 → NP_082064.3 protein FAM83C

Status: VALIDATED

Source sequence(s)

AL845445

Consensus CDS

CCDS50770.1

UniProtKB/Swiss-Prot

A2ARK0, Q14CG2

UniProtKB/TrEMBL

A0A6Q6PLP7

Related

ENSMUSP00000159338.2, ENSMUST00000239423.2

Conserved Domains (2) summary

PHA03247
Location:291 → 471

PHA03247; large tegument protein UL36; Provisional

cl15239
Location:20 → 289

PLDc_SF; Catalytic domain of phospholipase D superfamily proteins