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    Or5m3b olfactory receptor family 5 subfamily M member 3B [ Mus musculus (house mouse) ]

    Gene ID: 258571, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Or5m3bprovided by MGI
    Official Full Name
    olfactory receptor family 5 subfamily M member 3Bprovided by MGI
    Primary source
    MGI:MGI:3030867
    See related
    Ensembl:ENSMUSG00000045392 AllianceGenome:MGI:3030867
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MOR199-2; Olfr1033
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    Expression
    Biased expression in liver E18 (RPKM 1.1), bladder adult (RPKM 0.7) and 13 other tissues See more
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    Genomic context

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    See Or5m3b in Genome Data Viewer
    Location:
    2 D; 2 49.71 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (85850984..85875152)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (86020640..86044808)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 5 subfamily M member 8 Neighboring gene olfactory receptor family 5 subfamily M member 3 Neighboring gene olfactory receptor family 5 subfamily M member 9 Neighboring gene olfactory receptor family 8 subfamily U member 37, pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The olfactory receptor gene superfamily of the mouse. Zhang X, et al. Nat Neurosci, 2002 Feb. PMID 11802173
    2. Different evolutionary processes shaped the mouse and human olfactory receptor gene families. Young JM, et al. Hum Mol Genet, 2002 Mar 1. PMID 11875048
    3. Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Young JM, et al. Genome Biol, 2003. PMID 14611657, Free PMC Article
    4. A unified nomenclature for vertebrate olfactory receptors. Olender T, et al. BMC Evol Biol, 2020 Apr 15. PMID 32295537, Free PMC Article
    5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables odorant binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables olfactory receptor activity ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within sensory perception of smell ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    olfactory receptor 1033
    Names
    olfactory receptor MOR199-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_146578.3 → NP_666789.1  olfactory receptor 1033

      See identical proteins and their annotated locations for NP_666789.1

      Status: REVIEWED

      Source sequence(s)
      AK041245, AL928839
      Consensus CDS
      CCDS16234.1
      UniProtKB/TrEMBL
      Q8VFK5, Q8VFK6
      Related
      ENSMUSP00000149818.2, ENSMUST00000214546.2
      Conserved Domains (1) summary
      cd15412
      Location:23 → 301
      7tmA_OR5M-like; olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      85850984..85875152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006499557.2 → XP_006499620.1  olfactory receptor 1033 isoform X1

      See identical proteins and their annotated locations for XP_006499620.1

      UniProtKB/TrEMBL
      Q8VFK5, Q8VFK6
      Conserved Domains (1) summary
      cd15412
      Location:23 → 301
      7tmA_OR5M-like; olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_011239565.2 → XP_011237867.1  olfactory receptor 1033 isoform X1

      See identical proteins and their annotated locations for XP_011237867.1

      UniProtKB/TrEMBL
      Q8VFK5, Q8VFK6
      Conserved Domains (1) summary
      cd15412
      Location:23 → 301
      7tmA_OR5M-like; olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein Strain
    Heading Accession and Version

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