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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001037846.3 → NP_001032935.2 CCR4-NOT transcription complex subunit 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform a.
- Source sequence(s)
-
AK078121, BB353467, BC065171, BM245866
- Consensus CDS
-
CCDS36064.1
- UniProtKB/Swiss-Prot
- Q3UE39, Q80YA5, Q8C5L3, Q9D0P1
- UniProtKB/TrEMBL
-
Q3TIJ0
- Related
- ENSMUSP00000100902.2, ENSMUST00000105267.8
- Conserved Domains (1) summary
-
- pfam04153
Location:396 → 519
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001037847.2 → NP_001032936.2 CCR4-NOT transcription complex subunit 2 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in its 5' coding region and uses an upstream translation start codon, compared to variant 1. The resulting isoform (d) is longer at the N-terminus, compared to isoform a.
- Source sequence(s)
-
AK078121, BB353467, BC065171, BM245866
- UniProtKB/TrEMBL
- A0A1S6GWJ6, Q3TIJ0
- Conserved Domains (1) summary
-
- pfam04153
Location:406 → 529
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001037848.3 → NP_001032937.1 CCR4-NOT transcription complex subunit 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 3' UTR, lacks several exons in the 3' coding region, and includes an alternate terminal exon, compared to variant 1. The resulting isoform (c) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AC139376, AK078121, BC065171, BG067916
- Consensus CDS
-
CCDS36065.1
- UniProtKB/TrEMBL
-
H7BWX6
- Related
- ENSMUSP00000020374.6, ENSMUST00000020374.6
-
NM_001359247.1 → NP_001346176.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC139376, AK078121, BB353467, BC043133, BC065171, CD578905
- UniProtKB/TrEMBL
-
Q3TIJ0
- Conserved Domains (1) summary
-
- pfam04153
Location:387 → 510
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001359248.1 → NP_001346177.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC139376, AK078121, BB353467, BC043133, BC065171, CX562783
- UniProtKB/TrEMBL
-
Q3TIJ0
- Conserved Domains (1) summary
-
- pfam04153
Location:387 → 510
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001359249.1 → NP_001346178.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC139376, AK011231, AK078121, BB353467, BC043133, BC065171, CD578905
- UniProtKB/TrEMBL
-
Q3TIJ0
- Conserved Domains (1) summary
-
- pfam04153
Location:387 → 510
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001359250.1 → NP_001346179.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC139376, AK078121, BB353467, BC043133, BC065171, CX562783
- UniProtKB/TrEMBL
-
Q3TIJ0
- Conserved Domains (1) summary
-
- pfam04153
Location:387 → 510
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001359251.1 → NP_001346180.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC139376, AK011231, AK078121, BB353467, BC043133, BC065171, CD578905
- UniProtKB/TrEMBL
-
Q3TIJ0
- Conserved Domains (1) summary
-
- pfam04153
Location:387 → 510
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001359252.1 → NP_001346181.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: VALIDATED
- Source sequence(s)
-
AC139376, AK078121, BB353467, BC043133, BC065171, CD578905, CX562783
- UniProtKB/TrEMBL
-
Q3TIJ0
- Conserved Domains (1) summary
-
- pfam04153
Location:387 → 510
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001359253.1 → NP_001346182.1 CCR4-NOT transcription complex subunit 2 isoform f
Status: VALIDATED
- Source sequence(s)
-
AC139376, AK078121, BB353467, BC043133, CX562783
- Conserved Domains (1) summary
-
- pfam04153
Location:206 → 329
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001359563.1 → NP_001346492.1 CCR4-NOT transcription complex subunit 2 isoform g
Status: VALIDATED
- Source sequence(s)
-
AC139376, AI428917, AK011231, BC065171
- Consensus CDS
-
CCDS88089.1
- UniProtKB/TrEMBL
-
Q5CZY5
- Related
- ENSMUSP00000100900.2, ENSMUST00000105265.8
- Conserved Domains (1) summary
-
- pfam04153
Location:311 → 434
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_028082.2 → NP_082358.2 CCR4-NOT transcription complex subunit 2 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1, resulting in an isoform (b) that is shorter than isoform 1.
- Source sequence(s)
-
AK078121, BB345568, BC065171, BC090624
- Consensus CDS
-
CCDS24185.2
- UniProtKB/TrEMBL
- E9Q027, Q5CZY5
- Related
- ENSMUSP00000132315.2, ENSMUST00000168036.8
- Conserved Domains (1) summary
-
- pfam04153
Location:355 → 478
- NOT2_3_5; NOT2 / NOT3 / NOT5 family