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    Inhbb inhibin beta-B [ Mus musculus (house mouse) ]

    Gene ID: 16324, updated on 27-Nov-2024

    Summary

    Official Symbol
    Inhbbprovided by MGI
    Official Full Name
    inhibin beta-Bprovided by MGI
    Primary source
    MGI:MGI:96571
    See related
    Ensembl:ENSMUSG00000037035 AllianceGenome:MGI:96571
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    This gene encodes a member of the TGF-beta (transforming growth factor-beta) superfamily of proteins. The encoded preproprotein is proteolytically processed to generate a subunit of the dimeric activin and inhibin protein complexes. These complexes activate and inhibit, respectively, follicle stimulating hormone secretion from the pituitary gland. Homozygous knockout mice for this gene exhibit eyelid defects. [provided by RefSeq, Aug 2016]
    Expression
    Biased expression in ovary adult (RPKM 148.1), mammary gland adult (RPKM 18.2) and 3 other tissues See more
    Orthologs
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    Genomic context

    See Inhbb in Genome Data Viewer
    Location:
    1 E2.3; 1 52.29 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (119343193..119349978, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (119415463..119422248, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene 3508 Neighboring gene STARR-seq mESC enhancer starr_02022 Neighboring gene STARR-seq mESC enhancer starr_02025 Neighboring gene predicted gene, 33388 Neighboring gene STARR-seq mESC enhancer starr_02027 Neighboring gene STARR-seq mESC enhancer starr_02028 Neighboring gene STARR-seq mESC enhancer starr_02029 Neighboring gene predicted gene, 41935 Neighboring gene predicted gene, 33490 Neighboring gene predicted gene, 33575

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (4)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables cytokine activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in activin receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in activin receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of apoptotic signaling pathway IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in cellular response to Thyroglobulin triiodothyronine IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to cAMP IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to cholesterol IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to cholesterol ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to insulin stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in cellular response to interleukin-1 IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to leptin stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in cellular response to starvation IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in cellular response to thyroid hormone stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in eye development TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in fat cell differentiation IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in female gonad development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of follicle-stimulating hormone secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of follicle-stimulating hormone secretion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of hepatocyte growth factor production ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of hepatocyte growth factor production ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within negative regulation of insulin secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within oocyte development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in pituitary gland development IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within positive regulation of apoptotic signaling pathway IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of follicle-stimulating hormone secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of follicle-stimulating hormone secretion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of ovulation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to gonadotropin IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to insecticide IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to wounding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in seminiferous tubule development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cell periphery IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region TAS
    Traceable Author Statement
    more info
     
    located_in extracellular space HDA PubMed 
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in perinuclear region of cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in perinuclear region of cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in perinuclear region of cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    inhibin beta B chain
    Names
    activin beta-B chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008381.4NP_032407.1  inhibin beta B chain preproprotein

      See identical proteins and their annotated locations for NP_032407.1

      Status: REVIEWED

      Source sequence(s)
      AK132352, BP771405, CB245693
      Consensus CDS
      CCDS15224.1
      UniProtKB/Swiss-Prot
      Q04999, Q3V1N0, Q61277, Q80VC4
      Related
      ENSMUSP00000044918.6, ENSMUST00000038765.6
      Conserved Domains (2) summary
      smart00204
      Location:307410
      TGFB; Transforming growth factor-beta (TGF-beta) family
      pfam00688
      Location:73282
      TGFb_propeptide; TGF-beta propeptide

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      119343193..119349978 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)