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    LOC100134868 uncharacterized LOC100134868 [ Homo sapiens (human) ]

    Gene ID: 100134868, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC100134868
    Gene description
    uncharacterized LOC100134868
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in thyroid (RPKM 3.1), brain (RPKM 2.2) and 25 other tissues See more
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    Genomic context

    See LOC100134868 in Genome Data Viewer
    Location:
    20p11.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (26009799..26023272)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (26013516..26026974)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (25990435..26003908)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene CFTR pseudogene 1 Neighboring gene long intergenic non-protein coding RNA 1733 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17680 Neighboring gene ReSE screen-validated silencer GRCh37_chr20:25980009-25980193 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:25990245-25990864 Neighboring gene family with sequence similarity 182 member A Neighboring gene BSND pseudogene 3 Neighboring gene NCOR1 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_004846.3 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL450124, BC038849, BC062357, BM987213, CR987009

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      26009799..26023272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      26013516..26026974
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)