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    Senp17 Sumo1/sentrin/SMT3 specific peptidase 17 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 408216, updated on 9-Dec-2024

    Summary

    Official Symbol
    Senp17provided by RGD
    Official Full Name
    Sumo1/sentrin/SMT3 specific peptidase 17provided by RGD
    Primary source
    RGD:1303080
    See related
    EnsemblRapid:ENSRNOG00000076735 AllianceGenome:RGD:1303080
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable peptidase activity. Predicted to be involved in negative regulation of apoptotic process and proteolysis. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Senp17 in Genome Data Viewer
    Location:
    4q42
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (162813023..162814450, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (161126901..161128328, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (160865065..160866064, complement)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930433N12 gene like Neighboring gene Sumo1/sentrin/SMT3 specific peptidase 18 Neighboring gene SUMO specific peptidase 2, pseudogene 3 Neighboring gene uncharacterized LOC134486644 Neighboring gene uncharacterized LOC120102399 Neighboring gene uncharacterized LOC134486646 Neighboring gene SUMO specific peptidase 2, pseudogene 1

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables cysteine-type peptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables deSUMOylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables peptidase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in protein desumoylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in proteolysis TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Sumo1/sentrin/SMT3 specific peptidase 17
    Names
    Sumo1/sentrin/Smt3 specific protease 17
    sentrin 17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002833.1NP_001002833.1  Sumo1/sentrin/SMT3 specific peptidase 17

      See identical proteins and their annotated locations for NP_001002833.1

      Status: PROVISIONAL

      Source sequence(s)
      BN000370
      UniProtKB/TrEMBL
      M0RCW3, Q6IE23
      Related
      ENSRNOP00000050577.4, ENSRNOT00000049542.5
      Conserved Domains (1) summary
      cl23802
      Location:244470
      Peptidase_C48; Ulp1 protease family, C-terminal catalytic domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      162813023..162814450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)