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    Stmnd1 stathmin domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 380842, updated on 27-Dec-2024

    Summary

    Official Symbol
    Stmnd1provided by MGI
    Official Full Name
    stathmin domain containing 1provided by MGI
    Primary source
    MGI:MGI:2686420
    See related
    Ensembl:ENSMUSG00000063529 AllianceGenome:MGI:2686420
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm1574
    Summary
    Predicted to be involved in regulation of microtubule polymerization or depolymerization. Orthologous to human STMND1 (stathmin domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See Stmnd1 in Genome Data Viewer
    Location:
    13 A5; 13 23.22 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (46427197..46453591)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (46273721..46300115)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34991 Neighboring gene STARR-seq mESC enhancer starr_34407 Neighboring gene predicted gene, 45949 Neighboring gene STARR-seq mESC enhancer starr_34408 Neighboring gene STARR-seq mESC enhancer starr_34412 Neighboring gene RNA binding motif protein 24 Neighboring gene predicted gene, 35110 Neighboring gene cyclase associated actin cytoskeleton regulatory protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    stathmin domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005422.1NP_001005422.1  stathmin domain-containing protein 1

      See identical proteins and their annotated locations for NP_001005422.1

      Status: PROVISIONAL

      Source sequence(s)
      BC064117
      Consensus CDS
      CCDS36650.1
      UniProtKB/Swiss-Prot
      Q6P3A1
      Related
      ENSMUSP00000075923.4, ENSMUST00000076622.4

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      46427197..46453591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)