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    4933413J09Rik RIKEN cDNA 4933413J09 gene [ Mus musculus (house mouse) ]

    Gene ID: 71106, updated on 22-Oct-2024

    Summary

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    Official Symbol
    4933413J09Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4933413J09 geneprovided by MGI
    Primary source
    MGI:MGI:1918356
    See related
    Ensembl:ENSMUSG00000090104 AllianceGenome:MGI:1918356
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GCSE
    Expression
    Broad expression in testis adult (RPKM 1.3), ovary adult (RPKM 0.9) and 25 other tissues See more
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    Genomic context

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    See 4933413J09Rik in Genome Data Viewer
    Location:
    14 A3; 14 16.09 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (26078702..26121611)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (26357547..26400456)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 7 pseudogene Neighboring gene predicted gene, 46445 Neighboring gene predicted gene, 34059 Neighboring gene STARR-seq mESC enhancer starr_36231 Neighboring gene STARR-seq mESC enhancer starr_36232 Neighboring gene STARR-seq mESC enhancer starr_36233 Neighboring gene predicted gene, 52114 Neighboring gene predicted gene, 34223 Neighboring gene sarcolemma associated protein Neighboring gene STARR-seq mESC enhancer starr_36237 Neighboring gene predicted gene, 24031 Neighboring gene ribosomal protein L34 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cracking the egg: molecular dynamics and evolutionary aspects of the transition from the fully grown oocyte to embryo. Evsikov AV, et al. Genes Dev, 2006 Oct 1. PMID 17015433, Free PMC Article
    2. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    3. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • germ cell specific protein

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038005.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC127597, AK087762
      Related
      ENSMUST00000059648.10

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      26078702..26121611
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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