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    Slain1os SLAIN motif family, member 1, opposite strand [ Mus musculus (house mouse) ]

    Gene ID: 70898, updated on 17-Aug-2024

    Summary

    Official Symbol
    Slain1osprovided by MGI
    Official Full Name
    SLAIN motif family, member 1, opposite strandprovided by MGI
    Primary source
    MGI:MGI:1918148
    See related
    Ensembl:ENSMUSG00000089707 AllianceGenome:MGI:1918148
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4921525B02Rik
    Expression
    Broad expression in CNS E18 (RPKM 2.4), cerebellum adult (RPKM 2.2) and 16 other tissues See more
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    Genomic context

    See Slain1os in Genome Data Viewer
    Location:
    14 E2.3; 14 52.83 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (103930419..103936868, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (103692983..103699432, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E10840 Neighboring gene STARR-positive B cell enhancer ABC_E5464 Neighboring gene predicted gene, 34907 Neighboring gene STARR-seq mESC enhancer starr_37505 Neighboring gene sciellin Neighboring gene STARR-seq mESC enhancer starr_37506 Neighboring gene STARR-seq mESC enhancer starr_37507 Neighboring gene STARR-positive B cell enhancer ABC_E10841 Neighboring gene SLAIN motif family, member 1 Neighboring gene STARR-seq mESC enhancer starr_37509 Neighboring gene STARR-seq mESC enhancer starr_37510 Neighboring gene predicted gene, 35197 Neighboring gene predicted gene, 35116 Neighboring gene STARR-seq mESC enhancer starr_37511 Neighboring gene endothelin receptor type B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Other Names

    • Slain1 opposite strand transcript

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045148.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC110092, AK029783
      Related
      ENSMUST00000160117.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      103930419..103936868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)