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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001145886.1 → NP_001139358.1 rho guanine nucleotide exchange factor TIAM1 isoform 1
See identical proteins and their annotated locations for NP_001139358.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same isoform (1).
- Source sequence(s)
-
AK017465, AK136856, AK147392, BC065126, CJ262109, CO042855
- Consensus CDS
-
CCDS28314.1
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
- Related
- ENSMUSP00000132137.2, ENSMUST00000163370.8
- Conserved Domains (6) summary
-
- smart00455
Location:766 → 832
- RBD; Raf-like Ras-binding domain
- smart00325
Location:1044 → 1233
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd00992
Location:846 → 925
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd01230
Location:432 → 558
- PH1_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, N-terminal domain
- cd01255
Location:1235 → 1406
- PH2_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, C-terminal domain
- pfam18385
Location:572 → 669
- Tiam_CC_Ex; T-lymphoma invasion and metastasis CC-Ex domain
-
NM_001145887.1 → NP_001139359.1 rho guanine nucleotide exchange factor TIAM1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks many 5' coding exons, and initiates translation at an alternate start codon, compared to variant 1. This results in a shorter isoform (2) with a distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AK136856, AK147392, BC065126, CJ262109, CO042855
- Consensus CDS
-
CCDS49904.1
- UniProtKB/TrEMBL
- E9Q1R7, Q3UVX2
- Related
- ENSMUSP00000126020.3, ENSMUST00000164263.9
- Conserved Domains (3) summary
-
- smart00325
Location:75 → 264
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd01255
Location:266 → 437
- PH2_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, C-terminal domain
- pfam00169
Location:314 → 426
- PH; PH domain
-
NM_001426931.1 → NP_001413860.1 rho guanine nucleotide exchange factor TIAM1 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC087840, AC102908, AC122218
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
-
NM_001426932.1 → NP_001413861.1 rho guanine nucleotide exchange factor TIAM1 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC087840, AC102908, AC122218, AC132099
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
-
NM_001426933.1 → NP_001413862.1 rho guanine nucleotide exchange factor TIAM1 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC087840, AC102908, AC122218, AC132099
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
-
NM_009384.4 → NP_033410.2 rho guanine nucleotide exchange factor TIAM1 isoform 1
See identical proteins and their annotated locations for NP_033410.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the predominant transcript. Variants 1 and 2 encode the same isoform (1).
- Source sequence(s)
-
AC087840, AC102908, AC122218
- Consensus CDS
-
CCDS28314.1
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
- Related
- ENSMUSP00000002588.4, ENSMUST00000002588.11
- Conserved Domains (6) summary
-
- smart00455
Location:766 → 832
- RBD; Raf-like Ras-binding domain
- smart00325
Location:1044 → 1233
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd00992
Location:846 → 925
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd01230
Location:432 → 558
- PH1_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, N-terminal domain
- cd01255
Location:1235 → 1406
- PH2_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, C-terminal domain
- pfam18385
Location:572 → 669
- Tiam_CC_Ex; T-lymphoma invasion and metastasis CC-Ex domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
89583999..89942488 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017316936.2 → XP_017172425.1 rho guanine nucleotide exchange factor TIAM1 isoform X1
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
- Conserved Domains (6) summary
-
- smart00455
Location:766 → 832
- RBD; Raf-like Ras-binding domain
- smart00325
Location:1044 → 1233
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd00992
Location:846 → 925
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd01230
Location:432 → 558
- PH1_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, N-terminal domain
- cd01255
Location:1235 → 1406
- PH2_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, C-terminal domain
- pfam18385
Location:572 → 669
- Tiam_CC_Ex; T-lymphoma invasion and metastasis CC-Ex domain
-
XM_030249040.2 → XP_030104900.1 rho guanine nucleotide exchange factor TIAM1 isoform X1
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
- Conserved Domains (6) summary
-
- smart00455
Location:766 → 832
- RBD; Raf-like Ras-binding domain
- smart00325
Location:1044 → 1233
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd00992
Location:846 → 925
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd01230
Location:432 → 558
- PH1_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, N-terminal domain
- cd01255
Location:1235 → 1406
- PH2_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, C-terminal domain
- pfam18385
Location:572 → 669
- Tiam_CC_Ex; T-lymphoma invasion and metastasis CC-Ex domain
-
XM_030249041.2 → XP_030104901.1 rho guanine nucleotide exchange factor TIAM1 isoform X1
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
- Conserved Domains (6) summary
-
- smart00455
Location:766 → 832
- RBD; Raf-like Ras-binding domain
- smart00325
Location:1044 → 1233
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd00992
Location:846 → 925
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd01230
Location:432 → 558
- PH1_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, N-terminal domain
- cd01255
Location:1235 → 1406
- PH2_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, C-terminal domain
- pfam18385
Location:572 → 669
- Tiam_CC_Ex; T-lymphoma invasion and metastasis CC-Ex domain
-
XM_036159872.1 → XP_036015765.1 rho guanine nucleotide exchange factor TIAM1 isoform X1
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
- Conserved Domains (6) summary
-
- smart00455
Location:766 → 832
- RBD; Raf-like Ras-binding domain
- smart00325
Location:1044 → 1233
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd00992
Location:846 → 925
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd01230
Location:432 → 558
- PH1_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, N-terminal domain
- cd01255
Location:1235 → 1406
- PH2_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, C-terminal domain
- pfam18385
Location:572 → 669
- Tiam_CC_Ex; T-lymphoma invasion and metastasis CC-Ex domain
-
XM_006522982.5 → XP_006523045.1 rho guanine nucleotide exchange factor TIAM1 isoform X1
See identical proteins and their annotated locations for XP_006523045.1
- UniProtKB/Swiss-Prot
-
Q60610
- UniProtKB/TrEMBL
-
G3UWG2
- Conserved Domains (6) summary
-
- smart00455
Location:766 → 832
- RBD; Raf-like Ras-binding domain
- smart00325
Location:1044 → 1233
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd00992
Location:846 → 925
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd01230
Location:432 → 558
- PH1_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, N-terminal domain
- cd01255
Location:1235 → 1406
- PH2_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, C-terminal domain
- pfam18385
Location:572 → 669
- Tiam_CC_Ex; T-lymphoma invasion and metastasis CC-Ex domain
-
XM_006522983.5 → XP_006523046.1 rho guanine nucleotide exchange factor TIAM1 isoform X2
- UniProtKB/TrEMBL
-
Q3UHH6
- Conserved Domains (6) summary
-
- smart00325
Location:751 → 940
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
- cd00992
Location:553 → 632
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- cd01230
Location:139 → 265
- PH1_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, N-terminal domain
- cd01255
Location:942 → 1113
- PH2_Tiam1_2; T-lymphoma invasion and metastasis 1 and 2 Pleckstrin Homology (PH) domain, C-terminal domain
- pfam02196
Location:473 → 542
- RBD; Raf-like Ras-binding domain
- pfam18385
Location:279 → 376
- Tiam_CC_Ex; T-lymphoma invasion and metastasis CC-Ex domain