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    Appbp2os amyloid beta precursor protein binding protein 2, opposite strand [ Mus musculus (house mouse) ]

    Gene ID: 654810, updated on 22-Oct-2024

    Summary

    Official Symbol
    Appbp2osprovided by MGI
    Official Full Name
    amyloid beta precursor protein binding protein 2, opposite strandprovided by MGI
    Primary source
    MGI:MGI:3603817
    See related
    Ensembl:ENSMUSG00000085628 AllianceGenome:MGI:3603817
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D630032N06Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 1.3), testis adult (RPKM 1.2) and 25 other tissues See more
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    Genomic context

    See Appbp2os in Genome Data Viewer
    Location:
    11 C; 11 51.34 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (85125992..85129130)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (85235166..85238304)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 51947 Neighboring gene predicted gene, 38935 Neighboring gene STARR-seq mESC enhancer starr_30238 Neighboring gene amyloid beta precursor protein binding protein 2 Neighboring gene STARR-seq mESC enhancer starr_30241 Neighboring gene STARR-positive B cell enhancer ABC_E593 Neighboring gene STARR-positive B cell enhancer ABC_E303 Neighboring gene protein phosphatase 1D magnesium-dependent, delta isoform Neighboring gene BCAS3 microtubule associated cell migration factor Neighboring gene STARR-seq mESC enhancer starr_30248 Neighboring gene STARR-seq mESC enhancer starr_30251 Neighboring gene limb enhancer upstream of Tbx2 Neighboring gene BCAS3 microtubule associated cell migration factor, opposite strand 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Other Names

    • amyloid beta precursor protein (cytoplasmic tail) binding protein 2, opposite strand

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_028329.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK085477, AL596183, BQ033447
      Related
      ENSMUST00000136454.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      85125992..85129130
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)