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    si:zfos-411a11.2 si:zfos-411a11.2 [ Danio rerio (zebrafish) ]

    Gene ID: 100000156, updated on 9-Dec-2024

    Summary

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    Official Symbol
    si:zfos-411a11.2provided by ZNC
    Official Full Name
    si:zfos-411a11.2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-131119-33
    See related
    AllianceGenome:ZFIN:ZDB-GENE-131119-33
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable aromatase activity; heme binding activity; and iron ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See si:zfos-411a11.2 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (15757..20730, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (87950..93513, complement)

    Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 2, subfamily Y, polypeptide 3 Neighboring gene si:ch1073-83n3.2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Metabolic disruption of zebrafish (Danio rerio) embryos by bisphenol A. An integrated metabolomic and transcriptomic approach. Ortiz-Villanueva E, et al. Environ Pollut, 2017 Dec. PMID 28780062
    2. Regulation of posterior body and epidermal morphogenesis in zebrafish by localized Yap1 and Wwtr1. Kimelman D, et al. Elife, 2017 Dec 28. PMID 29283341, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables aromatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450 2G1
    Names
    zmp:0000000718

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007126.7 Reference GRCz11 Primary Assembly

      Range
      15757..20730 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017351113.3 → XP_017206602.1  cytochrome P450 2G1

      UniProtKB/TrEMBL
      A0A8M6YUY2
      Conserved Domains (1) summary
      pfam00067
      Location:40 → 487
      p450; Cytochrome P450
    Nucleotide Protein Strain
    Heading Accession and Version

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