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    niban2b niban apoptosis regulator 2b [ Danio rerio (zebrafish) ]

    Gene ID: 556540, updated on 9-Dec-2024

    Summary

    Official Symbol
    niban2bprovided by ZNC
    Official Full Name
    niban apoptosis regulator 2bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6218
    See related
    Ensembl:ENSDARG00000008026 AllianceGenome:ZFIN:ZDB-GENE-030131-6218
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fi39c12; fam129bb; wu:fi39c12; wu:fi40e07; si:dkey-286j20.1
    Summary
    Orthologous to human NIBAN2 (niban apoptosis regulator 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See niban2b in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (28917841..28970059, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (28317688..28369906, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene alpha-1-antiproteinase 2-like Neighboring gene neural proliferation, differentiation and control, 1b Neighboring gene syntaxin binding protein 1b Neighboring gene whirlin b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    protein Niban 2b
    Names
    family with sequence similarity 129 member Bb

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001326382.1NP_001313311.1  protein Niban 2b

      Status: VALIDATED

      Source sequence(s)
      CU467983, CU929058
      UniProtKB/TrEMBL
      A0A8M1P2L3, F1R7A2
      Related
      ENSDARP00000147973.1, ENSDART00000191119.1
      Conserved Domains (1) summary
      smart00233
      Location:70192
      PH; Pleckstrin homology domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      28917841..28970059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394580.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      740..53124 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395237.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      201791..218466 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)