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    muc5.2 mucin 5.2 [ Danio rerio (zebrafish) ]

    Gene ID: 572172, updated on 9-Dec-2024

    Summary

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    Official Symbol
    muc5.2provided by ZNC
    Official Full Name
    mucin 5.2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-121108-1
    See related
    Ensembl:ENSDARG00000058556 AllianceGenome:ZFIN:ZDB-GENE-121108-1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    muc5b
    Summary
    Predicted to be active in extracellular matrix and extracellular space. Is expressed in pharynx. Human ortholog(s) of this gene implicated in bronchiolitis; dry eye syndrome; idiopathic pulmonary fibrosis; interstitial lung disease 2; and urinary bladder cancer. Orthologous to human MUC5AC (mucin 5AC, oligomeric mucus/gel-forming) and MUC5B (mucin 5B, oligomeric mucus/gel-forming). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See muc5.2 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    46
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (8407892..8445172)
    105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (8330824..8368281)

    Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene intestinal mucin-like protein Neighboring gene mucin 5.1, oligomeric mucus/gel-forming Neighboring gene FA complementation group I Neighboring gene polymerase (DNA directed), gamma Neighboring gene transfer RNA arginine (anticodon UCG)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    mucin 5.2; mucin-2
    Names
    mucin 5b
    unm_sa927

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007136.7 Reference GRCz11 Primary Assembly

      Range
      8407892..8445172
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068217494.1 → XP_068073595.1  mucin-2

      Related
      ENSDARP00000129173.1, ENSDART00000153536.3
    Nucleotide Protein Strain
    Heading Accession and Version

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