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    dad1 defender against cell death 1 [ Danio rerio (zebrafish) ]

    Gene ID: 566527, updated on 9-Dec-2024

    Summary

    Official Symbol
    dad1provided by ZNC
    Official Full Name
    defender against cell death 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060503-233
    See related
    Ensembl:ENSDARG00000102105 AllianceGenome:ZFIN:ZDB-GENE-060503-233
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:ch211-9d9.5
    Summary
    Predicted to be involved in protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be part of oligosaccharyltransferase complex. Orthologous to human DAD1 (defender against cell death 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See dad1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (51640849..51644034, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (52048087..52051272, complement)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene polymeric immunoglobulin receptor Neighboring gene polymeric immunoglobulin receptor Neighboring gene abhydrolase domain containing 4, N-acyl phospholipase B Neighboring gene transglutaminase 1 like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of oligosaccharyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of oligosaccharyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1
    NP_001093909.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100439.1NP_001093909.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1

      See identical proteins and their annotated locations for NP_001093909.1

      Status: PROVISIONAL

      Source sequence(s)
      BC150399
      UniProtKB/TrEMBL
      A0A8M1NEA1, A7E2L0
      Related
      ENSDARP00000132059.1, ENSDART00000157899.2
      Conserved Domains (1) summary
      pfam02109
      Location:7113
      DAD; DAD family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      51640849..51644034 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)