cfap58 cilia and flagella associated protein 58 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cfap58provided by ZNC
Official Full Name: cilia and flagella associated protein 58provided by ZNC
Primary source: ZFIN:ZDB-GENE-060929-128
See related: Ensembl:ENSDARG00000069435 AllianceGenome:ZFIN:ZDB-GENE-060929-128
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: ccdc147; zgc:153620
Summary: Predicted to be located in motile cilium. Predicted to be active in cytoskeleton. Human ortholog(s) of this gene implicated in spermatogenic failure 49. Orthologous to human CFAP58 (cilia and flagella associated protein 58). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 18

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	1	NC_007112.7 (47831619..48012257)
105	previous assembly	GRCz10 (GCF_000002035.5)	1	NC_007112.6 (47140387..47321025)

Chromosome 1 - NC_007112.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in cell projection	IEA Inferred from Electronic Annotation more info
located_in cilium	IEA Inferred from Electronic Annotation more info
is_active_in cytoskeleton	IBA Inferred from Biological aspect of Ancestor more info
located_in motile cilium	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: cilia- and flagella-associated protein 58

Names: coiled-coil domain containing 147

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001077556.3 → NP_001071024.3 cilia- and flagella-associated protein 58

Status: VALIDATED

Source sequence(s)

CR381623, CU407322, LO018637

UniProtKB/TrEMBL

A0A8N7UYD1, F1QGB9

Related

ENSDARP00000091840.3, ENSDART00000101066.5

Conserved Domains (1) summary

COG1196
Location:218 → 845

Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]