upp2 uridine phosphorylase 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: upp2provided by ZNC
Official Full Name: uridine phosphorylase 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-830
See related: Ensembl:ENSDARG00000036833 AllianceGenome:ZFIN:ZDB-GENE-040426-830
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: uppl; zgc:55883
Summary: Predicted to enable uridine phosphorylase activity. Predicted to be involved in uridine catabolic process. Predicted to act upstream of or within nucleoside metabolic process and nucleotide catabolic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human UPP2 (uridine phosphorylase 2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 9

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (16097812..16108999, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (16160546..16171733, complement)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables catalytic activity	IEA Inferred from Electronic Annotation more info
enables glycosyltransferase activity	IEA Inferred from Electronic Annotation more info
enables pentosyltransferase activity	IEA Inferred from Electronic Annotation more info
enables transferase activity	IEA Inferred from Electronic Annotation more info
enables uridine phosphorylase activity	IBA Inferred from Biological aspect of Ancestor more info
enables uridine phosphorylase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in UMP salvage	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within nucleoside metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within nucleotide catabolic process	IEA Inferred from Electronic Annotation more info
involved_in uridine catabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uridine phosphorylase 2

Names: uridine phosphorylase, like

NP_956438.1

EC 2.4.2.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.