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    naxe NAD(P)HX epimerase [ Danio rerio (zebrafish) ]

    Gene ID: 436891, updated on 9-Dec-2024

    Summary

    Official Symbol
    naxeprovided by ZNC
    Official Full Name
    NAD(P)HX epimeraseprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-362
    See related
    Ensembl:ENSDARG00000058806 AllianceGenome:ZFIN:ZDB-GENE-040718-362
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    apoa1bp; zgc:92263
    Summary
    Predicted to enable NAD(P)HX epimerase activity. Predicted to act upstream of or within lipid transport. Predicted to be located in extracellular region and mitochondrion. Orthologous to human NAXE (NAD(P)HX epimerase). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See naxe in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (7408275..7412647)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (7489350..7493722)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene squalene epoxidase b Neighboring gene oxidation resistance 1b Neighboring gene RAB25, member RAS oncogene family a Neighboring gene splicing factor 3b, subunit 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables NAD(P)HX epimerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables NAD(P)HX epimerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within lipid transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    NAD(P)H-hydrate epimerase
    Names
    aibp1
    apolipoprotein A-I binding protein
    NP_001002618.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002618.1NP_001002618.1  NAD(P)H-hydrate epimerase precursor

      See identical proteins and their annotated locations for NP_001002618.1

      Status: PROVISIONAL

      Source sequence(s)
      BC075969
      UniProtKB/Swiss-Prot
      Q6DHK1
      Related
      ENSDARP00000076185.4, ENSDART00000081746.5
      Conserved Domains (1) summary
      cl00318
      Location:48282
      YjeF_N; YjeF-related protein N-terminus

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      7408275..7412647
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)