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    pttg1ipb PTTG1 interacting protein b [ Danio rerio (zebrafish) ]

    Gene ID: 449768, updated on 9-Dec-2024

    Summary

    Official Symbol
    pttg1ipbprovided by ZNC
    Official Full Name
    PTTG1 interacting protein bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041010-10
    See related
    Ensembl:ENSDARG00000040039 AllianceGenome:ZFIN:ZDB-GENE-041010-10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    pttg1ip; zgc:103708
    Summary
    Acts upstream of or within hemopoiesis. Predicted to be located in membrane. Predicted to be active in cytoplasm and nucleus. Is expressed in neural crest; pigment cell; pronephric duct; retina; and yolk syncytial layer. Orthologous to human PTTG1IP (PTTG1 interacting protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See pttg1ipb in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (12655288..12659116, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (12684085..12687943, complement)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene thrombospondin-type laminin G domain and EAR repeats b Neighboring gene small ubiquitin like modifier 3b Neighboring gene myosin X, like 3 Neighboring gene galactosidase, beta 1-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within hemopoiesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    PTTG1 interacting protein b
    Names
    pituitary tumor-transforming 1 interacting protein b

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005941.1NP_001005941.1  PTTG1 interacting protein b precursor

      See identical proteins and their annotated locations for NP_001005941.1

      Status: PROVISIONAL

      Source sequence(s)
      BC083469
      UniProtKB/TrEMBL
      B2GQV5, F6PF77, Q5XJ41
      Related
      ENSDARP00000058564.5, ENSDART00000058565.6

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      12655288..12659116 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005167479.5XP_005167536.1  PTTG1 interacting protein b isoform X1

      UniProtKB/TrEMBL
      A0A8M2BFI4