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    zgc:113452 zgc:113452 [ Danio rerio (zebrafish) ]

    Gene ID: 569975, updated on 9-Dec-2024

    Summary

    Official Symbol
    zgc:113452provided by ZNC
    Official Full Name
    zgc:113452provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050913-16
    See related
    Ensembl:ENSDARG00000074146 AllianceGenome:ZFIN:ZDB-GENE-050913-16
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See zgc:113452 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (314193..316737)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (301382..303870)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene alanine aminotransferase 2 Neighboring gene zinc finger protein 846 Neighboring gene zinc finger protein 1008 Neighboring gene gastrula zinc finger protein XlCGF8.2DB-like Neighboring gene gastrula zinc finger protein XlCGF8.2DB Neighboring gene zgc:174263

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC113452

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC569975

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030240.2NP_001025411.2  uncharacterized protein LOC569975

      Status: VALIDATED

      Source sequence(s)
      CU928013
      Related
      ENSDARP00000076523.3, ENSDART00000082086.4

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      314193..316737
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)