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    LAMB2P1 laminin subunit beta 2 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 22973, updated on 10-Dec-2024

    Summary

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    Official Symbol
    LAMB2P1provided by HGNC
    Official Full Name
    laminin subunit beta 2 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:6488
    See related
    AllianceGenome:HGNC:6488
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LAMB2L
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    Genomic context

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    See LAMB2P1 in Genome Data Viewer
    Location:
    3p21.31
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (49152859..49154401, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (49180928..49182470, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (49190292..49191834, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 19 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49157555-49158544 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49158545-49159533 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19855 Neighboring gene laminin subunit beta 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:49165495-49166412 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:49168941-49169756 Neighboring gene uncharacterized LOC124909377 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:49170574-49171389 Neighboring gene CRISPRi-validated cis-regulatory element chr3.2093 Neighboring gene Sharpr-MPRA regulatory region 3170 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:49200790-49201290 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14355 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14356 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19856 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19857 Neighboring gene coiled-coil domain containing 71 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14357 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14358 Neighboring gene kelch domain containing 8B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the human laminin beta2 chain locus (LAMB2): linkage to a gene containing a nonprocessed, transcribed LAMB2-like pseudogene (LAMB2L) and to the gene encoding glutaminyl tRNA synthetase (QARS). Durkin ME, et al. Cytogenet Cell Genet, 1999. PMID 10393422
    2. Changes in bacterial and eukaryotic community structure after mass lysis of filamentous cyanobacteria associated with viruses. van Hannen EJ, et al. Appl Environ Microbiol, 1999 Feb. PMID 9925618, Free PMC Article
    3. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • laminin, beta 2 pseudogene 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_004405.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AJ009558

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      49152859..49154401 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      49180928..49182470 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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