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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001285429.2 → NP_001272358.1 elongation factor 1-delta isoform b
See identical proteins and their annotated locations for NP_001272358.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 4 and 13 encode the same isoform.
- Source sequence(s)
-
AC116520
- Consensus CDS
-
CCDS27554.1
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- UniProtKB/TrEMBL
-
Q80T06
- Conserved Domains (1) summary
-
- pfam00736
Location:198 → 281
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
NM_001285430.2 → NP_001272359.1 elongation factor 1-delta isoform b
See identical proteins and their annotated locations for NP_001272359.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 4 and 13 encode the same isoform.
- Source sequence(s)
-
AC116520
- Consensus CDS
-
CCDS27554.1
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- UniProtKB/TrEMBL
-
Q80T06
- Related
- ENSMUSP00000023235.7, ENSMUST00000023235.13
- Conserved Domains (1) summary
-
- pfam00736
Location:198 → 281
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
NM_001285431.2 → NP_001272360.1 elongation factor 1-delta isoform c
See identical proteins and their annotated locations for NP_001272360.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks portions of the 5' and central coding regions, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (c) is shorter, compared to isoform a. Variants 5, 6, 7 and 12 encode the same isoform.
- Source sequence(s)
-
AC116520
- Consensus CDS
-
CCDS70638.1
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- UniProtKB/TrEMBL
-
A0A0R4J1L2
- Conserved Domains (1) summary
-
- pfam00736
Location:174 → 257
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
NM_001285432.2 → NP_001272361.1 elongation factor 1-delta isoform c
See identical proteins and their annotated locations for NP_001272361.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR, lacks portions of the 5' and central coding regions, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (c) is shorter, compared to isoform a. Variants 5, 6, 7 and 12 encode the same isoform.
- Source sequence(s)
-
AC116520
- Consensus CDS
-
CCDS70638.1
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- UniProtKB/TrEMBL
-
A0A0R4J1L2
- Related
- ENSMUSP00000105599.3, ENSMUST00000109972.9
- Conserved Domains (1) summary
-
- pfam00736
Location:174 → 257
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
NM_001285433.2 → NP_001272362.1 elongation factor 1-delta isoform c
See identical proteins and their annotated locations for NP_001272362.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR, lacks portions of the 5' and central coding regions, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (c) is shorter, compared to isoform a. Variants 5, 6, 7 and 12 encode the same isoform.
- Source sequence(s)
-
AC116520
- Consensus CDS
-
CCDS70638.1
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- UniProtKB/TrEMBL
-
A0A0R4J1L2
- Related
- ENSMUSP00000112141.3, ENSMUST00000116440.9
- Conserved Domains (1) summary
-
- pfam00736
Location:174 → 257
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
NM_001285434.2 → NP_001272363.1 elongation factor 1-delta isoform d
See identical proteins and their annotated locations for NP_001272363.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR and the coding region but maintains the reading frame, compared to variant 1. The encoded isoform (d) is shorter, compared to isoform a.
- Source sequence(s)
-
AC116520
- Consensus CDS
-
CCDS70639.1
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- UniProtKB/TrEMBL
-
Q91VK2
- Related
- ENSMUSP00000087109.4, ENSMUST00000089680.10
- Conserved Domains (1) summary
-
- pfam00736
Location:193 → 276
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
NM_001411966.1 → NP_001398895.1 elongation factor 1-delta isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (9) differs in the 5' UTR, lacks portions of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (e) is shorter, compared to isoform a.
- Source sequence(s)
-
AC116520
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
-
NM_001411967.1 → NP_001398896.1 elongation factor 1-delta isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (10) differs in the 5' UTR, lacks portions of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (e) is shorter, compared to isoform a.
- Source sequence(s)
-
AC116520
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
-
NM_001411968.1 → NP_001398897.1 elongation factor 1-delta isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (11) differs in the 5' UTR, lacks portions of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (e) is shorter, compared to isoform a.
- Source sequence(s)
-
AC116520
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
-
NM_001411969.1 → NP_001398898.1 elongation factor 1-delta isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (12) differs in the 5' UTR, lacks portions of the 5' and central coding regions, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (c) is shorter, compared to isoform a. Variants 5, 6, 7 and 12 encode the same isoform.
- Source sequence(s)
-
AC116520
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- UniProtKB/TrEMBL
-
A0A0R4J1L2
-
NM_001411970.1 → NP_001398899.1 elongation factor 1-delta isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (13) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 4 and 13 encode the same isoform.
- Source sequence(s)
-
AC116520
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- UniProtKB/TrEMBL
-
Q80T06
-
NM_023240.4 → NP_075729.2 elongation factor 1-delta isoform b
See identical proteins and their annotated locations for NP_075729.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 4 and 13 encode the same isoform.
- Source sequence(s)
-
AC116520
- Consensus CDS
-
CCDS27554.1
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- UniProtKB/TrEMBL
-
Q80T06
- Related
- ENSMUSP00000116360.2, ENSMUST00000154584.9
- Conserved Domains (1) summary
-
- pfam00736
Location:198 → 281
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
NM_029663.3 → NP_083939.1 elongation factor 1-delta isoform a
See identical proteins and their annotated locations for NP_083939.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AC116520
- Consensus CDS
-
CCDS27553.1
- UniProtKB/TrEMBL
- A0A0R4J1E2, F6ZFU0
- Related
- ENSMUSP00000087110.6, ENSMUST00000089681.12
- Conserved Domains (1) summary
-
- pfam00736
Location:577 → 660
- EF1_GNE; EF-1 guanine nucleotide exchange domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000081.7 Reference GRCm39 C57BL/6J
- Range
-
75766643..75781425 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006521267.4 → XP_006521330.1 elongation factor 1-delta isoform X1
See identical proteins and their annotated locations for XP_006521330.1
- UniProtKB/TrEMBL
-
F6ZFU0
- Conserved Domains (2) summary
-
- pfam16471
Location:478 → 515
- JIP_LZII; JNK-interacting protein leucine zipper II
- pfam00736
Location:596 → 679
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
XM_036159544.1 → XP_036015437.1 elongation factor 1-delta isoform X5
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- Conserved Domains (1) summary
-
- pfam00736
Location:217 → 300
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
XM_006521262.5 → XP_006521325.2 elongation factor 1-delta isoform X2
- UniProtKB/TrEMBL
-
F6ZFU0
- Conserved Domains (2) summary
-
- pfam16471
Location:477 → 514
- JIP_LZII; JNK-interacting protein leucine zipper II
- pfam00736
Location:595 → 678
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
XM_006521265.5 → XP_006521328.2 elongation factor 1-delta isoform X4
- UniProtKB/TrEMBL
-
F6ZFU0
- Related
- ENSMUSP00000114753.2, ENSMUST00000137426.8
- Conserved Domains (2) summary
-
- pfam16471
Location:435 → 472
- JIP_LZII; JNK-interacting protein leucine zipper II
- pfam00736
Location:553 → 636
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
XM_006521261.4 → XP_006521324.2 elongation factor 1-delta isoform X1
See identical proteins and their annotated locations for XP_006521324.2
- UniProtKB/TrEMBL
-
F6ZFU0
- Conserved Domains (2) summary
-
- pfam16471
Location:478 → 515
- JIP_LZII; JNK-interacting protein leucine zipper II
- pfam00736
Location:596 → 679
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
XM_006521264.5 → XP_006521327.2 elongation factor 1-delta isoform X3
- UniProtKB/TrEMBL
-
F6ZFU0
- Conserved Domains (2) summary
-
- pfam16471
Location:458 → 495
- JIP_LZII; JNK-interacting protein leucine zipper II
- pfam00736
Location:576 → 659
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
XM_036159543.1 → XP_036015436.1 elongation factor 1-delta isoform X5
- UniProtKB/Swiss-Prot
- P57776, Q68FG5, Q9CWW2, Q9CWY1, Q9CYD4, Q9CYJ5
- Conserved Domains (1) summary
-
- pfam00736
Location:217 → 300
- EF1_GNE; EF-1 guanine nucleotide exchange domain
-
XM_006521266.5 → XP_006521329.2 elongation factor 1-delta isoform X1
See identical proteins and their annotated locations for XP_006521329.2
- UniProtKB/TrEMBL
-
F6ZFU0
- Conserved Domains (2) summary
-
- pfam16471
Location:478 → 515
- JIP_LZII; JNK-interacting protein leucine zipper II
- pfam00736
Location:596 → 679
- EF1_GNE; EF-1 guanine nucleotide exchange domain