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    Ifi44 interferon-induced protein 44 [ Mus musculus (house mouse) ]

    Gene ID: 99899, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ifi44provided by MGI
    Official Full Name
    interferon-induced protein 44provided by MGI
    Primary source
    MGI:MGI:2443016
    See related
    Ensembl:ENSMUSG00000028037 AllianceGenome:MGI:2443016
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    p44; MTAP44; A430056A10Rik
    Summary
    Acts upstream of or within response to bacterium. Predicted to be located in cytoplasm. Is expressed in central nervous system and retina. Orthologous to human IFI44 (interferon induced protein 44). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in kidney adult (RPKM 4.7), liver E18 (RPKM 2.1) and 19 other tissues See more
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    Genomic context

    See Ifi44 in Genome Data Viewer
    Location:
    3 H3; 3 76.91 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (151436559..151455580, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (151730922..151749910, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor L4 Neighboring gene predicted gene, 24458 Neighboring gene STARR-seq mESC enhancer starr_09275 Neighboring gene interferon-induced protein 44 like Neighboring gene STARR-seq mESC enhancer starr_09276 Neighboring gene prostaglandin F receptor

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (5) 
    • Targeted (3) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    interferon-induced protein 44
    Names
    microtubule-associated protein 44

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001370771.1NP_001357700.1  interferon-induced protein 44 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC121969, AC135237
    2. NM_133871.3NP_598632.2  interferon-induced protein 44 isoform 1

      See identical proteins and their annotated locations for NP_598632.2

      Status: VALIDATED

      Source sequence(s)
      AC121969, AC135237
      Consensus CDS
      CCDS17911.1
      UniProtKB/Swiss-Prot
      Q8BV66, Q9ER37
      Related
      ENSMUSP00000029671.8, ENSMUST00000029671.9

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      151436559..151455580 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036163484.1XP_036019377.1  interferon-induced protein 44 isoform X1