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    Nup210l nucleoporin 210-like [ Mus musculus (house mouse) ]

    Gene ID: 77595, updated on 9-Dec-2024

    Summary

    Official Symbol
    Nup210lprovided by MGI
    Official Full Name
    nucleoporin 210-likeprovided by MGI
    Primary source
    MGI:MGI:1924845
    See related
    Ensembl:ENSMUSG00000027939 AllianceGenome:MGI:1924845
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    R26-EGFP; 4930548O11Rik; Tg(Gt(ROSA)26Sor-EGFP)130910Eps
    Summary
    Acts upstream of or within Sertoli cell development and spermatid development. Predicted to be located in membrane. Predicted to be part of nuclear pore. Orthologous to human NUP210L (nucleoporin 210 like). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 14.1) and CNS E11.5 (RPKM 0.7) See more
    Orthologs
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    Genomic context

    See Nup210l in Genome Data Viewer
    Location:
    3 F1; 3 39.2 cM
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (90011445..90119458)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (90101007..90212151)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_08271 Neighboring gene STARR-positive B cell enhancer ABC_E3447 Neighboring gene STARR-positive B cell enhancer ABC_E7923 Neighboring gene microRNA 190b Neighboring gene STARR-seq mESC enhancer starr_08272 Neighboring gene tropomyosin 3, gamma Neighboring gene predicted gene, 34865 Neighboring gene predicted gene, 23723 Neighboring gene STARR-seq mESC enhancer starr_08276 Neighboring gene predicted gene, 24185 Neighboring gene STARR-positive B cell enhancer ABC_E1624 Neighboring gene ribosomal protein S27 Neighboring gene RAB13, member RAS oncogene family

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in membrane  
    part_of nuclear pore  

    General protein information

    Preferred Names
    nuclear pore membrane glycoprotein 210-like
    Names
    nucleoporin 210 kDa-like
    nucleoporin Nup210-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029937.2NP_084213.1  nuclear pore membrane glycoprotein 210-like precursor

      See identical proteins and their annotated locations for NP_084213.1

      Status: VALIDATED

      Source sequence(s)
      AC119825, AC121963, AC163616
      Consensus CDS
      CCDS50969.1
      UniProtKB/Swiss-Prot
      Q9D2F7
      UniProtKB/TrEMBL
      A0A0G2JFZ8
      Related
      ENSMUSP00000029548.5, ENSMUST00000029548.9
      Conserved Domains (2) summary
      pfam02368
      Location:10791153
      Big_2; Bacterial Ig-like domain (group 2)
      cl02708
      Location:476523
      Big_2; Bacterial Ig-like domain (group 2)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      90011445..90119458
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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