U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tmem174 transmembrane protein 174 [ Mus musculus (house mouse) ]

    Gene ID: 68344, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem174provided by MGI
    Official Full Name
    transmembrane protein 174provided by MGI
    Primary source
    MGI:MGI:1915594
    See related
    Ensembl:ENSMUSG00000046082 AllianceGenome:MGI:1915594
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    0610009B10Rik
    Summary
    Involved in phosphate ion homeostasis. Located in apical plasma membrane. Is expressed in esophagus; intestine; metanephros; and reproductive system. Orthologous to human TMEM174 (transmembrane protein 174). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward kidney adult (RPKM 170.3) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tmem174 in Genome Data Viewer
    Location:
    13 D1; 13 52.11 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (98771486..98773918, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (98634978..98637410, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41033 Neighboring gene predicted gene, 48049 Neighboring gene calponin 3, acidic pseudogene Neighboring gene transmembrane protein 171 Neighboring gene predicted gene 9465

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (4)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in phosphate ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in apical plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026685.2NP_080961.1  transmembrane protein 174

      See identical proteins and their annotated locations for NP_080961.1

      Status: VALIDATED

      Source sequence(s)
      AC131187, AK002365
      Consensus CDS
      CCDS26715.1
      UniProtKB/Swiss-Prot
      Q96LY0, Q9DCX7
      Related
      ENSMUSP00000057581.5, ENSMUST00000050389.5
      Conserved Domains (1) summary
      pfam15029
      Location:10241
      DUF4526; Protein of unknown function (DUF4526)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      98771486..98773918 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)