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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_028228.1 RefSeqGene
- Range
-
4719..203056
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_025003.5 → NP_079279.3 A disintegrin and metalloproteinase with thrombospondin motifs 20 preproprotein
See identical proteins and their annotated locations for NP_079279.3
Status: REVIEWED
- Source sequence(s)
-
AC090525, AC120104, AF488804, AJ515153, CN292892
- Consensus CDS
-
CCDS31778.2
- UniProtKB/Swiss-Prot
- A6NNC9, J3QT00, P59510
- Related
- ENSP00000374071.3, ENST00000389420.8
- Conserved Domains (7) summary
-
- smart00209
Location:559 → 611
- TSP1; Thrombospondin type 1 repeats
- cd04273
Location:259 → 464
- ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
- pfam01421
Location:259 → 467
- Reprolysin; Reprolysin (M12B) family zinc metalloprotease
- pfam01562
Location:64 → 185
- Pep_M12B_propep; Reprolysin family propeptide
- pfam05986
Location:721 → 840
- ADAM_spacer1; ADAM-TS Spacer 1
- pfam08685
Location:1714 → 1909
- GON; GON domain
- cl15278
Location:1482 → 1525
- TSP_1; Thrombospondin type 1 domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
43352763..43552203 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011538754.3 → XP_011537056.1 A disintegrin and metalloproteinase with thrombospondin motifs 20 isoform X1
- UniProtKB/Swiss-Prot
- A6NNC9, J3QT00, P59510
- Conserved Domains (7) summary
-
- smart00209
Location:560 → 612
- TSP1; Thrombospondin type 1 repeats
- cd04273
Location:259 → 464
- ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
- pfam01421
Location:259 → 467
- Reprolysin; Reprolysin (M12B) family zinc metalloprotease
- pfam01562
Location:64 → 185
- Pep_M12B_propep; Reprolysin family propeptide
- pfam05986
Location:722 → 841
- ADAM_spacer1; ADAM-TS Spacer 1
- pfam08685
Location:1715 → 1910
- GON; GON domain
- cl15278
Location:1483 → 1526
- TSP_1; Thrombospondin type 1 domain
-
XM_017019979.2 → XP_016875468.1 A disintegrin and metalloproteinase with thrombospondin motifs 20 isoform X2
- Conserved Domains (3) summary
-
- smart00209
Location:155 → 207
- TSP1; Thrombospondin type 1 repeats
- pfam05986
Location:317 → 436
- ADAM_spacer1; ADAM-TS Spacer 1
- cl00064
Location:4 → 59
- ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
43312136..43512777 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054373256.1 → XP_054229231.1 A disintegrin and metalloproteinase with thrombospondin motifs 20 isoform X1
- UniProtKB/Swiss-Prot
- A6NNC9, J3QT00, P59510
-
XM_054373257.1 → XP_054229232.1 A disintegrin and metalloproteinase with thrombospondin motifs 20 isoform X2
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_175851.1: Suppressed sequence
- Description
- NM_175851.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.