U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    E130018O15Rik RIKEN cDNA E130018O15 gene [ Mus musculus (house mouse) ]

    Gene ID: 442795, updated on 17-Aug-2024

    Summary

    Official Symbol
    E130018O15Rikprovided by MGI
    Official Full Name
    RIKEN cDNA E130018O15 geneprovided by MGI
    Primary source
    MGI:MGI:3045238
    See related
    Ensembl:ENSMUSG00000055944 AllianceGenome:MGI:3045238
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See E130018O15Rik in Genome Data Viewer
    Location:
    5 B2- B3; 5 18.13 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (35536496..35545820, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (35379152..35388476, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930478P22 gene Neighboring gene STARR-positive B cell enhancer mm9_chr5:35704527-35704827 Neighboring gene predicted gene, 52798 Neighboring gene H6 homeobox 1 Neighboring gene RIKEN cDNA A930033C23 gene Neighboring gene predicted gene, 40283

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_152157.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152824
      Related
      ENSMUST00000069741.4

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      35536496..35545820 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)