U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DGAT2-DT DGAT2 divergent transcript [ Homo sapiens (human) ]

    Gene ID: 283214, updated on 10-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    DGAT2-DTprovided by HGNC
    Official Full Name
    DGAT2 divergent transcriptprovided by HGNC
    Primary source
    HGNC:HGNC:27451
    See related
    Ensembl:ENSG00000247867 AllianceGenome:HGNC:27451
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DGAT2-DT in Genome Data Viewer
    Location:
    11q13.5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (75758455..75768647, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (75687871..75698370, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (75469500..75479692, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369392 Neighboring gene monoacylglycerol O-acyltransferase 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3773 Neighboring gene RNA, 7SL, cytoplasmic 786, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5275 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:75479126-75479626 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3774 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3775 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5276 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5277 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:75487905-75488193 Neighboring gene diacylglycerol O-acyltransferase 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:75492457-75493023 Neighboring gene Sharpr-MPRA regulatory region 10576 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3776 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5278 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:75524366-75525565 Neighboring gene Sharpr-MPRA regulatory region 8 Neighboring gene UVRAG divergent transcript

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

    Go to the top of the page Help

    Other Names

    • CTD-2530H12.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_046090.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AP001922, BC039351
      Related
      ENST00000499390.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      75758455..75768647 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      75687871..75698370 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials