NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001135170.2 → NP_001128642.1 complement C1q tumor necrosis factor-related protein 7 isoform a precursor
See identical proteins and their annotated locations for NP_001128642.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AC007016, BC022187, BE856929, BX647781
- Consensus CDS
-
CCDS47025.1
- UniProtKB/TrEMBL
-
A0A3B0IT49
- Related
- ENSP00000295297.4, ENST00000295297.4
- Conserved Domains (2) summary
-
- pfam01391
Location:78 → 144
- Collagen; Collagen triple helix repeat (20 copies)
- pfam00386
Location:156 → 280
- C1q; C1q domain
-
NM_001135171.2 → NP_001128643.1 complement C1q tumor necrosis factor-related protein 7 isoform b precursor
See identical proteins and their annotated locations for NP_001128643.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and uses a downstream translation initiation codon, compared to variant 1, resulting in an isoform (b) with a shorter N-terminus, compared to isoform a. Both variants 2 and 3 encode the same isoform.
- Source sequence(s)
-
AC007016, AC099550, BE856929, DB069980
- Consensus CDS
-
CCDS3414.1
- UniProtKB/Swiss-Prot
- B2RBT3, J3KPW3, Q9BXJ2
- UniProtKB/TrEMBL
-
A0A3B0IT49
- Related
- ENSP00000410722.1, ENST00000429690.5
- Conserved Domains (2) summary
-
- pfam00386
Location:149 → 273
- C1q; C1q domain
- pfam01391
Location:59 → 108
- Collagen; Collagen triple helix repeat (20 copies)
-
NM_031911.5 → NP_114117.1 complement C1q tumor necrosis factor-related protein 7 isoform b precursor
See identical proteins and their annotated locations for NP_114117.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and uses a downstream translation initiation codon, compared to variant 1, resulting in an isoform (b) with a shorter N-terminus, compared to isoform a. Both variants 2 and 3 encode the same isoform.
- Source sequence(s)
-
AC007016, AF329839, BE856929, DB290077
- Consensus CDS
-
CCDS3414.1
- UniProtKB/Swiss-Prot
- B2RBT3, J3KPW3, Q9BXJ2
- UniProtKB/TrEMBL
-
A0A3B0IT49
- Related
- ENSP00000388914.2, ENST00000444304.3
- Conserved Domains (2) summary
-
- pfam00386
Location:149 → 273
- C1q; C1q domain
- pfam01391
Location:59 → 108
- Collagen; Collagen triple helix repeat (20 copies)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
15339786..15446167
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011513772.2 → XP_011512074.1 complement C1q tumor necrosis factor-related protein 7 isoform X1
See identical proteins and their annotated locations for XP_011512074.1
- UniProtKB/TrEMBL
-
A0A3B0IT49
- Conserved Domains (2) summary
-
- pfam01391
Location:78 → 144
- Collagen; Collagen triple helix repeat (20 copies)
- pfam00386
Location:156 → 280
- C1q; C1q domain
-
XM_047449566.1 → XP_047305522.1 complement C1q tumor necrosis factor-related protein 7 isoform X2
- UniProtKB/Swiss-Prot
- B2RBT3, J3KPW3, Q9BXJ2
- UniProtKB/TrEMBL
-
A0A3B0IT49
-
XM_011513773.2 → XP_011512075.1 complement C1q tumor necrosis factor-related protein 7 isoform X2
See identical proteins and their annotated locations for XP_011512075.1
- UniProtKB/Swiss-Prot
- B2RBT3, J3KPW3, Q9BXJ2
- UniProtKB/TrEMBL
-
A0A3B0IT49
- Conserved Domains (2) summary
-
- pfam00386
Location:149 → 273
- C1q; C1q domain
- pfam01391
Location:59 → 108
- Collagen; Collagen triple helix repeat (20 copies)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
15321456..15428083
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054348848.1 → XP_054204823.1 complement C1q tumor necrosis factor-related protein 7 isoform X1
- UniProtKB/TrEMBL
-
A0A3B0IT49
-
XM_054348849.1 → XP_054204824.1 complement C1q tumor necrosis factor-related protein 7 isoform X2
- UniProtKB/Swiss-Prot
- B2RBT3, J3KPW3, Q9BXJ2
- UniProtKB/TrEMBL
-
A0A3B0IT49
-
XM_054348850.1 → XP_054204825.1 complement C1q tumor necrosis factor-related protein 7 isoform X2
- UniProtKB/Swiss-Prot
- B2RBT3, J3KPW3, Q9BXJ2
- UniProtKB/TrEMBL
-
A0A3B0IT49