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    cebpb CCAAT enhancer binding protein beta [ Danio rerio (zebrafish) ]

    Gene ID: 140814, updated on 9-Dec-2024

    Summary

    Official Symbol
    cebpbprovided by ZNC
    Official Full Name
    CCAAT enhancer binding protein betaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-020111-3
    See related
    Ensembl:ENSDARG00000042725 AllianceGenome:ZFIN:ZDB-GENE-020111-3
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    cb380; c/ebpb; fe11e05; wu:fe11e05
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within negative regulation of gene expression; response to bacterium; and response to yeast. Predicted to be located in nucleus. Is expressed in several structures, including EVL; adipose tissue; digestive system; macrophage; and periderm. Orthologous to human CEBPB (CCAAT enhancer binding protein beta). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See cebpb in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (28448265..28449782, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (28414257..28415774, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110439999 Neighboring gene uncharacterized LOC110440000 Neighboring gene plasmanylethanolamine desaturase 1 Neighboring gene solute carrier family 52 member 3-1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General protein information

    Preferred Names
    CCAAT/enhancer-binding protein beta
    Names
    CCAAT/enhancer binding protein (C/EBP), beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_131884.2NP_571959.2  CCAAT/enhancer-binding protein beta

      See identical proteins and their annotated locations for NP_571959.2

      Status: PROVISIONAL

      Source sequence(s)
      BC049401
      UniProtKB/TrEMBL
      Q7ZU07
      Related
      ENSDARP00000062701.3, ENSDART00000062702.4
      Conserved Domains (1) summary
      cd14712
      Location:207277
      bZIP_CEBPB; Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein beta (CEBPB): a DNA-binding and dimerization domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      28448265..28449782 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)