actr1b actin related protein 1B [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: actr1bprovided by ZNC
Official Full Name: actin related protein 1Bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-2695
See related: Ensembl:ENSDARG00000011611 AllianceGenome:ZFIN:ZDB-GENE-040426-2695
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: actr1; zehn1110; zgc:56317; wu:fc22g09; wu:fc56d01; wu:fy52e08; hm:zehn1110
Summary: Predicted to be part of dynactin complex. Orthologous to human ACTR1B (actin related protein 1B). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 10

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	10	NC_007121.7 (42521970..42540839)
105	previous assembly	GRCz10 (GCF_000002035.5)	10	NC_007121.6 (42693590..42712459)

Chromosome 10 - NC_007121.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc22g09.x1 (e-PCR)
- UniSTS:203887

fa02b06.s1 (e-PCR)
- UniSTS:202139

fc56d01 (e-PCR)
- UniSTS:189390

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
part_of dynactin complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: actin related protein 1B

Names: ARP1 actin related protein 1, centractin; ARP1 actin-related protein 1 homolog B; actin related protein 1, centractin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_213372.1 → NP_998537.1 actin related protein 1B

See identical proteins and their annotated locations for NP_998537.1

Status: PROVISIONAL

Source sequence(s)

BC046069

UniProtKB/TrEMBL

A0A8N1TQK8, Q7ZUZ2

Related

ENSDARP00000015781.7, ENSDART00000010420.9

Conserved Domains (1) summary

cl17037
Location:5 → 376

NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily